| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0451 |
|---|
| Symbol | ppnK |
|---|
| ID | 7134667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 392276 |
|---|
| End bp | 393163 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643528862 |
|---|
| Product | ATP-NAD kinase |
|---|
| Protein accession | YP_002424947 |
|---|
| Protein GI | 218666029 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0061] Predicted sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC CCTTTCAGCG CGTCTTGCTC GTCAGCAAAT ACCATGATCC CTCGGTTCTC
CCTGGGTTGC GACAACTGCG GGATTTTTTG CTGGCGCGAG ACATGCCCAC CTTTCTGGAA
AGCCAAAGTG CTGCGGATAT CGGCGACAGC CTGGGGCTGC CGCTGCTTTC CTTCGCGGAA
GCGGATGCCG GTTCGGACCT CGTCATCGCC CTTGGCGGAG ATGGTACCCT GTTAGGGACC
GCGCGCCAGA CCGCACAAAG CGGCATCCCT ATCCTCGGCA TCAATCAGGG GCGTCTCGGC
TTTCTCGCCG ACCTCTCCAT CCACCAGATC AGCGAGGCCT TGCCACCCAT TCTGGAGGGG
CATTACCAGC AGGACCTGCG CAGTATCCTC CATGCCGAGC TATGGCGTAG TGAGGAGCGT
GTCCATACCG GCCTCGCCGT CAACGAAGTC TTTATCCACA AGGGCGGCGG CGAGAGCATG
ATTGAACTGC AGGTGCAGAT GGACGGCCGT TTCGTCTATA CCCAGCGCGC CGACGGTCTC
ATCATCGCCA CACCTACCGG CTCCACGGCC TACGCCATGT CGGCGGGCGG GCCCATCCTC
ACGCCCACCC TCGCGGCGCT CCTCCTCGTC CTCATCTGCC CGCACACCCT CACGGCGCGG
CCCCTGGCGG TGGCGGATTC GGTGGAAATC GTGGCCCGTC TCACCGCCAG CCGCCAGTCC
GCCGCGCTCA GCCTGGACAG CCACTGCAGC GTCCCTCTGG AAATCGGCGA CGAAATCGTC
ATCCGCCGAG CCTCCTGCGC GGCCCGTTTC ATCCACCCCG AGGAAGAAAA CTTCTTCCAG
ATCCTGCGCG GCAAGCTGCA CTGGGCCGAC TCCCCCGGAA CAGACTGA
|
|---|
| Protein sequence | MTQPFQRVLL VSKYHDPSVL PGLRQLRDFL LARDMPTFLE SQSAADIGDS LGLPLLSFAE
ADAGSDLVIA LGGDGTLLGT ARQTAQSGIP ILGINQGRLG FLADLSIHQI SEALPPILEG
HYQQDLRSIL HAELWRSEER VHTGLAVNEV FIHKGGGESM IELQVQMDGR FVYTQRADGL
IIATPTGSTA YAMSAGGPIL TPTLAALLLV LICPHTLTAR PLAVADSVEI VARLTASRQS
AALSLDSHCS VPLEIGDEIV IRRASCAARF IHPEEENFFQ ILRGKLHWAD SPGTD
|
|---|
| |