Gene AFE_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0446 
Symbol 
ID7135624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp386292 
End bp386987 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID643528857 
Producthypothetical protein 
Protein accessionYP_002424942 
Protein GI218667438 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.371395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTAC CCGTTCCCGC CAGCGAGAAA TCCCTCTTCC AGCGCATTCA CCTGCGCCGC 
TGGTTCGTTC AGGGTTTACT CATCTCGCTG CCTATCGGGC TGACGGTTTA CGTGGTGCTG 
TGGATTGGCG GCTGGCTGAA CAATCTTTTC GAGGCGCCGA TCAGAGCGAT TTTTGGTATC 
GACATCCCCG GTCTGGGCCT GTTGCTGACG CTGCTGATCA TTCTCGGTGT CGGCTTCCTC 
GCCTCCCACG TCCTGACCGC CTGGATTTTT GAAAAACTGA ACGCCGTGCT CGGGCGCATT 
CCCGTATTGC ACAGCCTCTA CAGCACCATT CACGAAACGG TAGGCCTGCT GTTTGGCGGA 
ACGGACCGCG GTTTCCGCAG CGCCGTGCTG GTGCGCCAGG GTGGTGACAT GGGCTATATC 
ATCGGTCTGA TCACGCGCGA CGCCCTCAGC GAGTTGCCGC ACCTGCCCGA GGATTGCGTC 
GCGGTATTTA TCCCCATGAG CTACGGCATC GGCGGCTTTA CCTGCCTCGT GCCACGCGAC 
AAAGTCATCC CCCTGCCCGA CCTCACCCCG CAACAGGCCC TGCGCTTCGC CATGGCGGGC 
GGGGTGGGCG GCGGAAAAGC CATCCGCGAA AAGCCTGGCG GCGGCTCTGA ATCAGCCAGA 
CCGGCGGCAG GCCGTCATCC GGAACCGGAC CGATAA
 
Protein sequence
MTLPVPASEK SLFQRIHLRR WFVQGLLISL PIGLTVYVVL WIGGWLNNLF EAPIRAIFGI 
DIPGLGLLLT LLIILGVGFL ASHVLTAWIF EKLNAVLGRI PVLHSLYSTI HETVGLLFGG 
TDRGFRSAVL VRQGGDMGYI IGLITRDALS ELPHLPEDCV AVFIPMSYGI GGFTCLVPRD 
KVIPLPDLTP QQALRFAMAG GVGGGKAIRE KPGGGSESAR PAAGRHPEPD R