| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0442 |
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| Symbol | rfbD |
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| ID | 7135137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 383516 |
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| End bp | 384385 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643528853 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_002424938 |
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| Protein GI | 218665614 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.121768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATCGTG TACTGCTGCT CGGCGCTCAG GGTCAGGTTG GCTGGGAACT GCAACGCAGC
CGACCTGCGT CGGTGGAACT GCGCGCGCTG GGACGCCCGG ATCTCGACAT TCTGGATGCC
GCCCAGGTTC TCGGGATGGC GGAATCCTTC CGACCTGACG CCATCATCAA TGCCGCCGCT
TACACCGCCG TGGACCGCGC CGAGTCGGAA TCCGCACGCG CTTATGCCGT GAACCGCGAT
GGGGCGGCCC ACTGCGCCCT GGCCGCCCAG GCCTGCGGCG CCCGCCTGAT CCACCTTTCT
ACCGATTTTG TCTTTGATGG TGCCCAGGCC ACGCCGTACC CGCCGGAGGC GCCCCTGGCG
CCCCTTGGCG TTTATGGTGC CAGCAAGGCC GACGGTGAGC GGCAGGTACA GGCCATTCTC
GGTGATACCG CACTCATCCT GCGTACCGCC TGGGTCTATA GCGCCCACGG CAGCAACTTC
GTCAAAACCA TGCTGCGTCT CATGGCCGAG CGGGACGTGT TGCGGGTGGT GGGAGACCAG
ATCGGCACCC CGACCTGGGC GGCGGGCCTC GCCCGCGCCA TCTGGAGTAC CCTGGATCAC
CCCGGCTTTA CCGGTATTCA GCACTGGACC GATGCCGGGG TGGCGTCCTG GTATGATTTT
GCCGTGGCCA TCCAGGAAGA AGCAGTGGCC GCCGGGCGAT TGCACCGCGC CATTCCCATC
GAAATGATCC CCACCAGTGC CTACCCCACC CCCGCCCGCC GTCCCGCCTG TGCCATACTG
GACAAAACCG CCAGTTACAC CGCGCTGGGC GCTGCGCCCC ATTGGCGCAC AGCGTTGCGC
CGGATGCTGA CCGAGCCCGA AGTCATCTGA
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| Protein sequence | MYRVLLLGAQ GQVGWELQRS RPASVELRAL GRPDLDILDA AQVLGMAESF RPDAIINAAA
YTAVDRAESE SARAYAVNRD GAAHCALAAQ ACGARLIHLS TDFVFDGAQA TPYPPEAPLA
PLGVYGASKA DGERQVQAIL GDTALILRTA WVYSAHGSNF VKTMLRLMAE RDVLRVVGDQ
IGTPTWAAGL ARAIWSTLDH PGFTGIQHWT DAGVASWYDF AVAIQEEAVA AGRLHRAIPI
EMIPTSAYPT PARRPACAIL DKTASYTALG AAPHWRTALR RMLTEPEVI
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