Gene AFE_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0430 
Symbol 
ID7135885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp374040 
End bp374795 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID643528841 
Productcompetence lipoprotein ComL, putative 
Protein accessionYP_002424926 
Protein GI218666506 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.761714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAC GCATACTGAT GTCCCTATGC TGTGCCGCCC TGATCGCCGG TTGCGCCAGC 
ACTCCGAACA ACCCTGACAA CTCTGCCGTC AGCCACGAAT CCGCCCGGGC GCTGTTTCAG
CCCGCCAAAC ACGCCATGGA TCGCGGCGAC TACGCCGCCG CCATCAAGCT TTTTGAAGAT
CTGGAGACCC GCTACCCCTA CGGCCCCTAC GCTGAACAGG CGCAACTGGA TACGGCCTAT
AGTTATTACC AGCGCGGAGA TTCCGAGGCG GCAGCGGCAG CGGCCGAACG CTTCATCAAG
CTGCACCCGG CCAATCCCTA TGTGGATTAC GCGTGGTATC TGAAAGGCAT CGCCTATTAT
CAGGCCATTC AGGGCGCGCA GGAAAATCCC CGGCCCGCCG AGGAGGCCTT CAGCACCCTC
GACACGCTGG CCAAACGCTG GCCGCACAGC GTTTACGCCG CCGACGCCCG CCTGCGCATG
GCCAAGATCA TCAACATCCT TGGCCAGCGC AATCTGGATA TCTGCAAGTT CTATTATGTG
CGTCACGCCT ATGTCGCCTC GGCAAACCGC TGCAATACAG TGATCACCCG CTACCAGTTG
AGCACCGCAC GGGAAGAGGC GCTCTACTAT CTGACACGGG ACTACCGGCA CCTGGACCTG
CCGCAACTGG CGCAGACCAC CGTCGCGGTG CTTGCCTACA ACTACCCCGG AAGCAAGTAT
CTTGCCGGTC TCGGCAGCAG CGCCAAGCCC GGGTGA
 
Protein sequence
MSKRILMSLC CAALIAGCAS TPNNPDNSAV SHESARALFQ PAKHAMDRGD YAAAIKLFED 
LETRYPYGPY AEQAQLDTAY SYYQRGDSEA AAAAAERFIK LHPANPYVDY AWYLKGIAYY
QAIQGAQENP RPAEEAFSTL DTLAKRWPHS VYAADARLRM AKIINILGQR NLDICKFYYV
RHAYVASANR CNTVITRYQL STAREEALYY LTRDYRHLDL PQLAQTTVAV LAYNYPGSKY
LAGLGSSAKP G