Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0430 |
Symbol | |
ID | 7135885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 374040 |
End bp | 374795 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643528841 |
Product | competence lipoprotein ComL, putative |
Protein accession | YP_002424926 |
Protein GI | 218666506 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.761714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAC GCATACTGAT GTCCCTATGC TGTGCCGCCC TGATCGCCGG TTGCGCCAGC ACTCCGAACA ACCCTGACAA CTCTGCCGTC AGCCACGAAT CCGCCCGGGC GCTGTTTCAG CCCGCCAAAC ACGCCATGGA TCGCGGCGAC TACGCCGCCG CCATCAAGCT TTTTGAAGAT CTGGAGACCC GCTACCCCTA CGGCCCCTAC GCTGAACAGG CGCAACTGGA TACGGCCTAT AGTTATTACC AGCGCGGAGA TTCCGAGGCG GCAGCGGCAG CGGCCGAACG CTTCATCAAG CTGCACCCGG CCAATCCCTA TGTGGATTAC GCGTGGTATC TGAAAGGCAT CGCCTATTAT CAGGCCATTC AGGGCGCGCA GGAAAATCCC CGGCCCGCCG AGGAGGCCTT CAGCACCCTC GACACGCTGG CCAAACGCTG GCCGCACAGC GTTTACGCCG CCGACGCCCG CCTGCGCATG GCCAAGATCA TCAACATCCT TGGCCAGCGC AATCTGGATA TCTGCAAGTT CTATTATGTG CGTCACGCCT ATGTCGCCTC GGCAAACCGC TGCAATACAG TGATCACCCG CTACCAGTTG AGCACCGCAC GGGAAGAGGC GCTCTACTAT CTGACACGGG ACTACCGGCA CCTGGACCTG CCGCAACTGG CGCAGACCAC CGTCGCGGTG CTTGCCTACA ACTACCCCGG AAGCAAGTAT CTTGCCGGTC TCGGCAGCAG CGCCAAGCCC GGGTGA
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Protein sequence | MSKRILMSLC CAALIAGCAS TPNNPDNSAV SHESARALFQ PAKHAMDRGD YAAAIKLFED LETRYPYGPY AEQAQLDTAY SYYQRGDSEA AAAAAERFIK LHPANPYVDY AWYLKGIAYY QAIQGAQENP RPAEEAFSTL DTLAKRWPHS VYAADARLRM AKIINILGQR NLDICKFYYV RHAYVASANR CNTVITRYQL STAREEALYY LTRDYRHLDL PQLAQTTVAV LAYNYPGSKY LAGLGSSAKP G
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