Gene AFE_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0421 
SymbolmltD 
ID7137171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp362833 
End bp364671 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content65% 
IMG OID643528832 
Productmembrane-bound lytic murein transglycosylase D 
Protein accessionYP_002424917 
Protein GI218666767 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC GAGTTCTCGC TATGGCCACG CTGGTGGCAC TCGGCGGCAT TCCTATGGCA 
TGGGCGGATA GCCAAACCAT AGGCCTGCAA CAAGGTGACC TCCAGACCGG CGTAGCACAG
GCCCTGAACG CCGGCGCGCA GAACGTGGAC CTGCAAAGCG GCGAACCGGT AGCGGGGCCG
GTCGGCAACG TCTCCGGCCT GTCGGCCACC CTGCAGCAGT TCGAGGCATC GGGCGCCTTT
GGCAACCAGA CGGGAGCCGG CAATGTCTGG ACCCATATCG ACGACGGCCT GCGCATCAGC
GACGTCTCCC GCTTGGAAGT GGATAAATGG CGTACCTGGT TCCTGCAACA TCAGGGCAAG
CTGGAACAGA TCCTCGACAA CTCCCGCCCC TTTCTGTATT ACGTGGTGAA CGCCGTTGCG
GAACGCGGCA TGCCCATGGA ACTGGCGCTG CTGCCGGCCA TCGAGAGCGG TTACAACCCC
AAGGCCTACT CCCCGGCGGC CGCGGCGGGC CTCTGGCAAT TCATACCCGG CACCGCACGC
AATTTCGGCC TGCAAAACAC CCGCTATGGC GATCCCCGCC TGAGTCTCAT CGCCTCCACC
AACGCCGCCC TCGATTACCT CTCCTACCTC TACAACTATT TCGGCGGCAA CTGGCTCCTC
GCCATCGCCT CCTACAACGC CGGGCAGGGT ACCGTTTCCG CCGCTATCCA GCAGAATGTC
GCGGCGGGTA AGCCCACCGA TTTCTGGGAC CTCTCTCTGC CGCAGCAAAC CGAAGACTAC
GTTGCCGAAC TCCTCGCCCT GGCGCAGGTC ATCAAAAATG CCAAGGCCTA CCATGTCTCC
CTGCCCGCCA TTCCCAACGC GGCACACATC GCGGTCGTGA CCACGCCCAA ATCCGTGGCC
CTGAACGTGG CGGCGAACCT GATGAACATG CCGGTCAGCG AACTGCAGCA CCTCAATGCC
GGGTTGAGCT ACGGCGTCGC CCCGGCCGAC TACCATCTGG TGGTGCCCAA AGACAAGGCC
GCCACCCTGA AGAGCGCGCT GCTGACCATG CCCCAGGAAG CCGCCGCTCA GCCCGTCGTT
GCGCTGCGGC CAGCGCCCAG CCCGGCCTTC CGTCGCGTCA TGCTTCGCCC CGGTGAGACG
CTCTGGCATC TGGCGCAACG GGCCGGCGTC AGCGTCACCA ATCTCGAGCG CTGGAATCAC
ATCCGTTCCG CGCGCGACCT GCAGGTCGGG CAACACCTGG TCGTCTACGG CGCCGGTGGA
TCCGGCCATC TGCAAAACGC CGTCTATGCC CGGAGCCGGG CGCGGGCGCT CACCGTGCGT
CCCGGCAACA CGCCCTCCCA GCTCGCGCAG CGGGCCGGCG TCAGCGTCAA GGACCTCATG
CGCTGGAACC ATATCCGTTC CGCGCGTGAC CTGCAGATCG GTGAAACCCT GCATATCCCG
GGTGGCGGTG GTAGCAGGCC CGCACAGGTC TATACCGCCG CGCGCGGCAA CCGGCGCCTC
ACCGTGCGGC CCGGTGAAAG TCTTTGGCAA ATCGCCCGGC GCGCCGGAGT GGGCGTCTCT
CTGCTGGCCC GCGCCAACCA TCTCACCGAA CGGACCATCC TCCATCCCGG ACAGGTGCTG
AACATCCCGG CACAAACCAT GGTCGCCGCC ATCAGCCGCC GGCAGGAACG CGCCGCCAGC
CGGGCGCGAA CGACGACTTA CGTGGTGCGT CCGGGCGACA CGCTCTGGCA GATCGCCCAG
CAGTTCCATG TCCAGCCCAA GTCGCTGATT CAATGGAATC GCCTGGCCTC CGCCAGCGAA
ATTCAACCGG GCTCACGCCT CACCATTTAT ACGCGCTGA
 
Protein sequence
MKKRVLAMAT LVALGGIPMA WADSQTIGLQ QGDLQTGVAQ ALNAGAQNVD LQSGEPVAGP 
VGNVSGLSAT LQQFEASGAF GNQTGAGNVW THIDDGLRIS DVSRLEVDKW RTWFLQHQGK
LEQILDNSRP FLYYVVNAVA ERGMPMELAL LPAIESGYNP KAYSPAAAAG LWQFIPGTAR
NFGLQNTRYG DPRLSLIAST NAALDYLSYL YNYFGGNWLL AIASYNAGQG TVSAAIQQNV
AAGKPTDFWD LSLPQQTEDY VAELLALAQV IKNAKAYHVS LPAIPNAAHI AVVTTPKSVA
LNVAANLMNM PVSELQHLNA GLSYGVAPAD YHLVVPKDKA ATLKSALLTM PQEAAAQPVV
ALRPAPSPAF RRVMLRPGET LWHLAQRAGV SVTNLERWNH IRSARDLQVG QHLVVYGAGG
SGHLQNAVYA RSRARALTVR PGNTPSQLAQ RAGVSVKDLM RWNHIRSARD LQIGETLHIP
GGGGSRPAQV YTAARGNRRL TVRPGESLWQ IARRAGVGVS LLARANHLTE RTILHPGQVL
NIPAQTMVAA ISRRQERAAS RARTTTYVVR PGDTLWQIAQ QFHVQPKSLI QWNRLASASE
IQPGSRLTIY TR