Gene AFE_0406 details

Gene Information

• Locus tag: AFE_0406
• Symbol: argD
• ID: 7134913
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 354301
• End bp: 355467
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643528817
• Product: acetylornithine aminotransferase
• Protein accession: YP_002424902
• Protein GI: 218667734
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4992] Ornithine/acetylornithine aminotransferase
• TIGRFAM ID: [TIGR00707] acetylornithine and succinylornithine aminotransferases

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCTCA TGTCCACTTA TGCCCGGTTA CCGGTCGCTT TTGCAAGGGG TGAGGGGGTC 
TGGCTCTATG ATACCGAGGG GCGCCGTTAT CTGGACGCCC TGGCAGGGAT CGCCGTCTGT 
GGCCTGGGGC ACAGCCATCC GGCGGTCACC CGCGCCCTGC AGACCCAGGC TGGGCAACTG 
TTGCACACTT CCAATCTCTA CCGTATTCCG GCGCAGGAAA AGCTGTCCGA TACCCTCTGC 
GCCGTCAGCG GCATGGATGC GGCCTTTTTC TGCAACAGCG GCGCAGAGGC CAATGAAGCG 
GCCATCAAAA TCGCCCGCCT CCATGGTCAT GGCAAGGGCA TCGCCGAACC GCAGATTCTG 
GTATTCAGCA ACGCTTTTCA TGGCCGCACC CTGGCGACCC TCACGGCCAC CGGCAATTTC 
CGCATCCAGG AAGGTTTCAG CCCCCTGCTG CCGGGTTTCG TGCGCGCCCC CTATGGCGAT 
CTTTCCACCG TCCGCGCCCT GGTTCAGGCC AACCCCGGCA TATGCGCCAT TCTCGCCGAG 
CCCCTTCAGG GAGAAGGTGG GGTGCGCCCG GCACCGGAAG GCTTCCTGAC CGGGCTGAGG 
GAGGTCTGCG ACGCGCACGG TCTGCTCCTG ATGCTGGACG AGGTGCAGAC CGGCATCGGC 
CGTACCGGGG CCTTCTTCGC CTACCAGCAG ATTCCCGGCC TGCGCCCCGA CGTGCTCAGT 
CTGGCCAAGG GCCTGGGCAA CGGCGTCCCC ATCGGCGCCA TGCTGGCCGG CCAATCGACG 
GCCGCGCTCT TCGGGCCGGG CAAACACGGC ACCACCTTTG GCGGTGGGCC GCTGGTCTGC 
GCCGCCGCCC AGGCCGTGCT CGACACCATG CAGCAAGAAG ACCTCCCCGC CCACGCCGGG 
CGGATGGGCG CCCTGCTCCG GCAGCGCCTG CAGAAGCGCC TTGGCGGGCA CCCCGAGGTG 
CTGGAGATAC GCGGCATGGG CCTGATGGTG GGCATCGAAC TGGCCCATAA ACCCGAACGC 
CTGGTGGAGC GCGCCCTGGA GGCTGGCCTG CTCATCAACG TCACGGCTGA AAAAGTCATT 
CGTCTGCTGC CCCCGCTGAT TCTGCAAGAG GCAGAAATCG ATCTTCTCGT CGCTGGCCTG 
GCCAGCCTTC TGGAATCCGC ATCATGA 

 

Protein sequence

MPLMSTYARL PVAFARGEGV WLYDTEGRRY LDALAGIAVC GLGHSHPAVT RALQTQAGQL 
LHTSNLYRIP AQEKLSDTLC AVSGMDAAFF CNSGAEANEA AIKIARLHGH GKGIAEPQIL 
VFSNAFHGRT LATLTATGNF RIQEGFSPLL PGFVRAPYGD LSTVRALVQA NPGICAILAE 
PLQGEGGVRP APEGFLTGLR EVCDAHGLLL MLDEVQTGIG RTGAFFAYQQ IPGLRPDVLS 
LAKGLGNGVP IGAMLAGQST AALFGPGKHG TTFGGGPLVC AAAQAVLDTM QQEDLPAHAG 
RMGALLRQRL QKRLGGHPEV LEIRGMGLMV GIELAHKPER LVERALEAGL LINVTAEKVI 
RLLPPLILQE AEIDLLVAGL ASLLESAS