Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0391 |
Symbol | infB |
ID | 7134685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 340438 |
End bp | 343065 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643528802 |
Product | translation initiation factor IF-2 |
Protein accession | YP_002424887 |
Protein GI | 218666901 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGTAA CTGTCGCCAA TTTTGCTGCT GAATTGGGTG TAACGAATGC TCGGTTGTTG GAGCAGTTGA ACGCTGCGGG CATTTCCAAG AATACGGCCG AGGATGTGGT CACTGAGGAC GACAAACATC GTCTTCTGGC TTCGTTGCGC AGTGCGCACG GAGAGGGTGG CGGTGAACCG CGCCGTATTA CGCTCAACCG CACCAGTACC ACCGAAATCA AACAATCCGT AGGCGCAGGC AAGTCGCGCA CGGTACAAGT GGAAGTGCGC CGCAAACGGA CTTACGTCAA ACGGGAAGCG ATAGCCGAAG AGGCTACCGA GTCTGTTATA CCGGAACAGT TGCCGGCCGA TGCTCAGGTG ACCACCGCTT TGCTGGAATC CGCGCCAGTC GTGGAAGCGG TCTCCGCAGG CGGGCCCGCG CCGGTTTCTG AGGAGCCGGA GCCGGTGGAG GAGGTTGTCG GTCAGCCGGA GCAGGTGCCG TACGATGTGG CGGCAGCGAG CGGAGAGGTG GCGGTGGTAC AAGAGGCGCC ACGTTCCGAA GTGAAGCTCG CGGCAGCTCC CTCACGCACC TCCGAGCGAC CTGCCCCGGA TCGTGGCAGG ACATCGACGG CCGGTACGGA TCGTGCACGT CCCGCAGCAG CGCCGGCCAG CAGAGCGCCT GCGGCAGCGC CGCCGCCAAA AGGCAAAAAA GCGGGGCCGG CTGGACGCGG CGGCGACGAT GACGCCCGCC GTGGCGGTGC TGCTCGGCGG GGCGGGCGGC GTAGTGAAGA CGGTGGCAAT GCCGATGCTC TGGCACGGCG CCGTAAGTCC GCAGACAAAC GAAACCACGG CCGGGGCGGT CCTGCGGTCA GCGAATGGGC GGTGGCACCG GTCATCCGCG AAGTGGCGCT CCCGGAAACG ATCACCGTGG GTGAACTGGC CAGCCGGATG GCGATCAAGG CTACCGACGT GATCAAAACG ATGATGAAGA TGGGGGTGAT GGCCACCATC AATCAGGTGA TCGATCAGGA AACCGCCGCA ATCGTCGTGG AAGAGTTGGG ACACAAGGTG AAGCTGGTGG GAATCACCAG CCCTGAGGCT TTTTTGACGG AAGACGGGGC GGCAGAGACG CCGGTCATGG GCCGGCGGCC CCCCGTGGTG ACCGTCATGG GGCATGTGGA TCATGGTAAA ACGTCGTTGT TGGACCGGAT TCGCTCTACC CAGGTAGCGA GTGGTGAGGC CGGGGGTATT ACCCAGCACA TCGGCGCCTA CCACGTGGAG ACGCCCAAGG GCATGGTGAC CTTCCTCGAT ACGCCTGGCC ACGAGGCGTT TACGGCGATG CGGGCCCGCG GCGCGCAGGC GACGGATATC GTCGTGCTGG TGGTGGCGGC CGATGACGGG GTGATGCCCC AGACGATCGA GGCGATTCAC CACGCCAAGG CGGCCAAGGT GCCCATCGTG GTGGCCGTCA ACAAGATCGA TAAGCCCTCC GTGGATCCGG AACGCATACG CCAGGAACTC GCCGGCCATG ATGTGGTGCC CGAGGAGTGG GGCGGTGACA CGCAATTCGT GAATGTTTCG GCAAAGACCG GGTTGCATAT CGACGATCTG CTGGACGCCA TTTTGTTGCA GGCGGAGATG CTGGATCTGG ATGTTCAGAT CAACGGTCCG GCGAAGGGGG TGGTCATCGA GTCCCGGCTG GATCGTGGAC GTGGTGTCGT GGCATCGGTG CTGGTCCGTC AGGGCACCCT GCATACGGGT GACATGCTTT TGGCCGGCGC GCAATTTGGA CGTGTACGGG CGCTGGTGGA TGATGCCGGG CGACCTGCAC AATCGGTGGC TCCGGGCATG CCGGCGGAGG TGCTCGGGCT GGGAGATGTC CCCCAGGCTG GTGACGAGGT GGTCGTGGTG GCGGATGAAC GCAAGGCTCG CGAAGTGGCG CTCTTTCGCC AGGGCAAGTT CCGTGATGTA CGTCTGGCGA AGAGTCAGAA GGCGACGCTG GAGAGCCTGT TCGAAGCGGC AGCGGATGGC CAGTTGCAGC AGTTGAATCT GCTGATCAAG GCGGACGTAC AGGGTTCCGC CGAGGCTTTG ACCACTACCT TGGAACGCCT TTCCACCTCG GAGGTCAAGG TCAATGTCAT CCACTCCGGG GTCGGTGGAA TCACGGAGTC CGATGTGAAT CTTGCCGCAG CGTCACAGGC GGTCATCATC GGCTTCAACG TGCGTGCGGA AGCTCCCGCG CGGCGCCTGA TCGAACATAG TGGGGTGGAT GTTCGTTACC ACAGTATCAT TTATGACGCC GTGGACGAGG TGAAGGCCGC CATGAGTGGT ATGCTCGCGC CGGAAATCCG TGAGCGTATT CTGGGTCATG CGCAGGTGCG TGAGATATTC CGGGTGCCCA AGGTGGGCAT GGTCGCCGGC TGTATGGTTA CCGACGGCCT CCTGCGGCGC AGCGCGAAGG TTCGGGTGAT CCGTCAGGAT GTGGTCATCC ATTCCGGAGA AATGGACTCG CTGCGGCGTT TCAAGGAAGA CGTCAAGGAA GTGCGTGAAG GCTTCGAGTG TGGCGTGGGT ATCCGCAACT TCAATGACCT GAAGAATGGT GACGTCATCG AGGCGTTTGA AACCACTGAA GTGGCGCGAA CGGTCTAG
|
Protein sequence | MTVTVANFAA ELGVTNARLL EQLNAAGISK NTAEDVVTED DKHRLLASLR SAHGEGGGEP RRITLNRTST TEIKQSVGAG KSRTVQVEVR RKRTYVKREA IAEEATESVI PEQLPADAQV TTALLESAPV VEAVSAGGPA PVSEEPEPVE EVVGQPEQVP YDVAAASGEV AVVQEAPRSE VKLAAAPSRT SERPAPDRGR TSTAGTDRAR PAAAPASRAP AAAPPPKGKK AGPAGRGGDD DARRGGAARR GGRRSEDGGN ADALARRRKS ADKRNHGRGG PAVSEWAVAP VIREVALPET ITVGELASRM AIKATDVIKT MMKMGVMATI NQVIDQETAA IVVEELGHKV KLVGITSPEA FLTEDGAAET PVMGRRPPVV TVMGHVDHGK TSLLDRIRST QVASGEAGGI TQHIGAYHVE TPKGMVTFLD TPGHEAFTAM RARGAQATDI VVLVVAADDG VMPQTIEAIH HAKAAKVPIV VAVNKIDKPS VDPERIRQEL AGHDVVPEEW GGDTQFVNVS AKTGLHIDDL LDAILLQAEM LDLDVQINGP AKGVVIESRL DRGRGVVASV LVRQGTLHTG DMLLAGAQFG RVRALVDDAG RPAQSVAPGM PAEVLGLGDV PQAGDEVVVV ADERKAREVA LFRQGKFRDV RLAKSQKATL ESLFEAAADG QLQQLNLLIK ADVQGSAEAL TTTLERLSTS EVKVNVIHSG VGGITESDVN LAAASQAVII GFNVRAEAPA RRLIEHSGVD VRYHSIIYDA VDEVKAAMSG MLAPEIRERI LGHAQVREIF RVPKVGMVAG CMVTDGLLRR SAKVRVIRQD VVIHSGEMDS LRRFKEDVKE VREGFECGVG IRNFNDLKNG DVIEAFETTE VARTV
|
| |