Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0380 |
Symbol | serS |
ID | 7136933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 330297 |
End bp | 331562 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643528791 |
Product | seryl-tRNA synthetase |
Protein accession | YP_002424882 |
Protein GI | 218667554 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.241897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGATC CCAGCTTGCT GCGCAGCTCC CCGGAAACCG TAGCTGCCGG CCTCGCTCGC CGCCACTTCA CCCTCGATGT GGCTGCCCTG AATGCCCTCG ATCAGCAGCG CAAAGCCCTG CAAATTCAGC TGGAACAGCT TCGCAACGCC CGCAATGAAG CTTCCAGACA GATCGGTCAG GCGCGCCGTC AGGGGCTCGA TACCGGTGCG ATGCAGGCCG CGGCAGCATC GAACGGCGAG GAGATCAAGA CCCTGGAGCA ATCACTGGAA CGTACCCTTG CCGAATGGGA TACGCTGACC ATCGGTCTGC CCAACATCCC GCAGGATTCG GTGCCCGACG GCCGCGATGA AGCGGATAAC GTAGTCCTGC GTCACTGGGG CTCGCCCAGC ACCTTTGCTT TTCCGCCCCG CGACCACGTC GAACTGGGCG AGGCCCTGGG TATCATCGAT TTTGCGGCGG GCGCACGCCT TGCCGGCACC CGTTTTGTGG TATTGCGTGG CGCCGGTGCC CGTCTCGAGC GCGCCCTGAC GCAATTCATG CTGGATTTGC ATACGACGGA ACACGGTTAC ACGGAAATCG CACCGCCTTT TCTCGCCAAC GCCGATTCCT TGTATGGTAC CGGGCAACTC CCCAAATTCG AAGAAGACCT CTTCGCCTTA CGAGACGACC CCTATTACCT GATCCCCACC GCCGAAGTGC CGCTCACCAA CCTGTTGCGT GGCGAGATCG TTGCCAGCCT GCCGCAGCGT TTCTGCGCCT ACACCCCCTG TTTTCGCCGT GAAGCGGGGG CCTATGGGCG CGATACCCGC GGCATGATCC GCCAGCATCA GTTCGACAAG GTGGAACTGG TGCAGATCGT CCGCCCTGAA GATTCCGCTC AGGCCCACGA AACGCTCACC GCCCATGCCG AAAAGGTCTT GCAACTGCTG GAGCTGCCCT ATCGCGTGAC GGCTCTCTGC GCCGGCGATC TGGGCTTCAG TGCTGCCAAA ACCTATGATC TCGAAGTCTG GCTGCCGGGC CAGAATCAGT ACCGAGAAAT CAGCTCTTGC AGCAATTTCG AAAGCTTTCA GGCGCGTCGC CTGCAATTGC GCTATCGTGC CGAAGACGGC AAGCCGCAAC TCGTCCATAC CCTCAATGGC TCCGGACTCG CCGTCGGCCG CACCCTGGTT GCGCTTCTGG AAAACCATCA ACAGGCCGAT GGCCGTATTC GTATTCCCGC CGCCCTGCGT CCCTACCTCG GCGGGATGAC CGTCATTCAG GCGTGA
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Protein sequence | MLDPSLLRSS PETVAAGLAR RHFTLDVAAL NALDQQRKAL QIQLEQLRNA RNEASRQIGQ ARRQGLDTGA MQAAAASNGE EIKTLEQSLE RTLAEWDTLT IGLPNIPQDS VPDGRDEADN VVLRHWGSPS TFAFPPRDHV ELGEALGIID FAAGARLAGT RFVVLRGAGA RLERALTQFM LDLHTTEHGY TEIAPPFLAN ADSLYGTGQL PKFEEDLFAL RDDPYYLIPT AEVPLTNLLR GEIVASLPQR FCAYTPCFRR EAGAYGRDTR GMIRQHQFDK VELVQIVRPE DSAQAHETLT AHAEKVLQLL ELPYRVTALC AGDLGFSAAK TYDLEVWLPG QNQYREISSC SNFESFQARR LQLRYRAEDG KPQLVHTLNG SGLAVGRTLV ALLENHQQAD GRIRIPAALR PYLGGMTVIQ A
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