Gene AFE_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0379 
Symbol 
ID7136632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp328976 
End bp330304 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content63% 
IMG OID643528790 
ProductATPase, AAA family 
Protein accessionYP_002424881 
Protein GI218667409 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAT CGTCCACCGA CCCTCGTCCC TTGGCGGCGC GGATGCGCCC GCAGACGCTG 
GACGCTTACG CCGGGCAGCG CCATCTGCTC GGCAAGGAAG GCCCGCTGCA GGCCATGGTG
CAGGCCGGGC ATCTGCACTC CATGATCCTC TGGGGCCCGC CAGGCAGTGG CAAAACCACC
CTGGCGCAAC TCCTGGCCCA CACCGCCGGC CGCCACTTTC AGATTTTGTC TGCCGTCAAC
AGCGGAGTGC GCGAGATCCG CGCCGCCGTC AGTAGCGCCG AGGCCGCCCA GTCCCTGGGG
CAGGGCACGG TCCTCTTCAT CGATGAAATC CATCGCTTCA ACAAAAGCCA GCAGGATGCC
TTGCTACCCT ATGTGGAAGA AGGCGTCGTG ACTCTCATCG GCGCAACGAC GGAAAACCCC
AGTTTCGCCT TGGTCAATGC CCTGCTGTCC CGGGCGCGGG TTTACGTCCT CAAGGCCCTG
ACCGAAGAAG AACTCGGCGC CGTCCTCGAT CATACCCTTG CCGACAGGGT GCTCGGTCTG
GGGGCACTGG CGATAGAGAT GTCCCCGGAA GTACGCAAGG GCTTGTTGAC CGCCGCCGAC
GGCGACGCGC GCCGTCTCCT CAACCTGCTC GACCTCGCGG TACAACTGGC ACCGGCACGG
GAGGGTAAAA CACAGATCAC CGCCGGGATC GTCGCCGCAG CCAGCGGTCA CTCCTGGCGA
CGCTTCGACC AAGGGGGGGA AGCCTTTTAC GACGAAATTT CCGCTTTTCA CAAGTCCCTG
CGCGGTTCCG ACCCCGACGC GGCCCTCTAC TGGCTGGCGC GGATGCTCGA CGGCGGCGCC
GACCCCCTTT ACCTTGCCCG TCGTCTGGTA CGCATGGCTT CCGAAGATGT TGGCCTTGCC
GACCCACGGG CTTTAGAAAT GGCCCTCGCC GCCAAGGACG CCTACGCCTT TCTTGGTTCG
CCCGAGGGGG AGCTGGCTCT GGCGCAGGCT ACGGTCTATC TCGCCAGTTG TCCCAAAAGT
AACCGCGTAT ACGACGCATG GAATGCCGTG CGTGCCGTCG TCAAAGGCGG CGGGAGTGCA
GAAGTGCCTC TCCACCTGCG CAACGCGCCC ACCGCGCTGC TCAAAACACT GGATTACGGC
CGGGAATATC AATACGATCA CGACTATCCT GATGCCATTG CTCCGGAACA GTCTTATCTG
CCCCCCGGTC TGCCCCAGGC CCATTTTTAT GACCCCAGCG ACCGCGGTCT GGAAACCCGC
ATTCAGGAGC GTTTGCGCTG GATAAACGCT CATCGTCAAC CTGACCGGGA GAAAAAACCC
CATGCTTGA
 
Protein sequence
MAASSTDPRP LAARMRPQTL DAYAGQRHLL GKEGPLQAMV QAGHLHSMIL WGPPGSGKTT 
LAQLLAHTAG RHFQILSAVN SGVREIRAAV SSAEAAQSLG QGTVLFIDEI HRFNKSQQDA
LLPYVEEGVV TLIGATTENP SFALVNALLS RARVYVLKAL TEEELGAVLD HTLADRVLGL
GALAIEMSPE VRKGLLTAAD GDARRLLNLL DLAVQLAPAR EGKTQITAGI VAAASGHSWR
RFDQGGEAFY DEISAFHKSL RGSDPDAALY WLARMLDGGA DPLYLARRLV RMASEDVGLA
DPRALEMALA AKDAYAFLGS PEGELALAQA TVYLASCPKS NRVYDAWNAV RAVVKGGGSA
EVPLHLRNAP TALLKTLDYG REYQYDHDYP DAIAPEQSYL PPGLPQAHFY DPSDRGLETR
IQERLRWINA HRQPDREKKP HA