Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0378 |
Symbol | |
ID | 7134790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 327878 |
End bp | 328948 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643528789 |
Product | outer membrane protein transport protein, OMPP1/FadL/TodX family |
Protein accession | YP_002424880 |
Protein GI | 218666275 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGCTT TGAAGACCCG CCTCGTCCTC GTTACCCTCG GTCTGTTAGT GGCTGCGCAG TCCCATGCCG CGGGTTTTGC CGCGCCGACC TCCGTGGTGG GGCTTTCGGA AGCCGGCGCC ACGGTGGCCG ACGGCGGACC CGTCAGCAGT TTTGCCGACA ATCCCGCAGA TATGGTCTTC TTTCCGGGTA CCCGGGTGGG TCTGGATATT CTCGCAACGC GCCCAGCTTA CAAGGTGGAT AACGGCAGTA GCAGCATCGA TGCGAGCAGC AATCTGCAGA TTCTGCCCGA TCTCTTTGTG ACCCATCGTT TCAATGATCT GCCACTGGCG GTGGGTCTCG GCATCACTTC ACCCTACAGC ATCAACGCCA CTTGGCCCGC CGGGACCTTT CCCGGACAAT CTTCGCTAAA AAATGACCTG CGGATCATTG ATGTGAATCC GGGGGTTGCC TATCTGCTGC TCCCCAACCT GAGCGTTGGA GTGGGTCTGG ATTATTACCA GGCGCTGAGT GCAACCTTTG GCCCGAATTC GGGCACCGGC GGAGGCGTCG GCGGTAACGT CGGGCTTTTC TACACCACCG AGCGCTTCAA TGCGGGACTC AGTTATCGCT CCGCGGCCAG CGTTTCGTCG GGCGGCGGCA GCATTGACCT CCCCAGTCGC GTACAGGCCG GTGTCCGCTA CCGATTTACC CCACGCTTTG CGAGCGAACT GGATGTGGAC TGGAATGACT GGAGCAATGC CCGGTTACCT GGCTATGGCA GCCTCGGCTG GAAGTCTGCC TTGGCCTATC GCCTCGGGCT CAGCTATCAT CTGAATCAGA ATCTGGAGCT CCGCGGTGGC CTCGCCCATG AGGGCAGCCC CGGCAACAGC TCGAGTTTTG ATGCGGCGGT GCCGGGAACC AGCAGCAATC TGGCCTCCTT CGGGCTGGGT ATCGGTCTGG GCGCATGGCA TTACGACATA GGTGCCTCCT ATGCCCTCTC CGGCAACACG ACGTCTTATT ACCCCGGCTT TGCAGGCACG TATAAAGCCA GTATCTTCAA CTTCGGTGCC GCAATTTCCC GGGATTTTTG A
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Protein sequence | MLALKTRLVL VTLGLLVAAQ SHAAGFAAPT SVVGLSEAGA TVADGGPVSS FADNPADMVF FPGTRVGLDI LATRPAYKVD NGSSSIDASS NLQILPDLFV THRFNDLPLA VGLGITSPYS INATWPAGTF PGQSSLKNDL RIIDVNPGVA YLLLPNLSVG VGLDYYQALS ATFGPNSGTG GGVGGNVGLF YTTERFNAGL SYRSAASVSS GGGSIDLPSR VQAGVRYRFT PRFASELDVD WNDWSNARLP GYGSLGWKSA LAYRLGLSYH LNQNLELRGG LAHEGSPGNS SSFDAAVPGT SSNLASFGLG IGLGAWHYDI GASYALSGNT TSYYPGFAGT YKASIFNFGA AISRDF
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