Gene AFE_0371 details

Gene Information

• Locus tag: AFE_0371
• Symbol: ispF
• ID: 7136819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 320904
• End bp: 321377
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643528783
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002424874
• Protein GI: 218667314
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.939448
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTATTG GTCACGGCTT TGACGTACAT GCGTTGGTGC CGGGAAGGGC TCTGATCCTC 
GGTGGCGTGT CGGTACCCTA TGAACGCGGT CTTGCCGGCC ACTCCGATGC TGACGTGCTC 
CTTCACTCCA TCTGTGATGC CCTGCTGGGG GCGGCTGCCC TGGGCGACAT CGGACGTCAT 
TTCCCCGATA CCGACGCCCG TTTCGAAGGT GCGGATTCGC GGCTCCTGCT CCGACATTGT 
CGTCAGTTGG TCCAGGGGAA AGGTTTTTCG GTAGGCAACG TGGATGCGAC CATCGTCTGT 
CAGCGTCCTA AATTGGCAGA TCATATTCCG CAGATGCGCG CCCATATTGC TGCTGACCTC 
GCTGTGGAGC TCGATGCGGT CAACATCAAA GCGACCACCA CGGAGCAATT GGGCTATACC 
GGTCGGGGTG AAGGCATTGC CGCCCACGCC GTCGTGCTGA TTCAGCATGT CTGA 

 

Protein sequence

MRIGHGFDVH ALVPGRALIL GGVSVPYERG LAGHSDADVL LHSICDALLG AAALGDIGRH 
FPDTDARFEG ADSRLLLRHC RQLVQGKGFS VGNVDATIVC QRPKLADHIP QMRAHIAADL 
AVELDAVNIK ATTTEQLGYT GRGEGIAAHA VVLIQHV