Gene AFE_0358 details

Gene Information

• Locus tag: AFE_0358
• Symbol: radC
• ID: 7134082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 308577
• End bp: 309251
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643528770
• Product: DNA repair protein RadC
• Protein accession: YP_002424861
• Protein GI: 218667466
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0732931
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATCA CTGATTGGCC GGTGGACGAG CGTCCGCGGG AAAGATTATT GCAAAAAGGG 
GCCGCGACGC TGTCGGATGC GGAATTGCTG GCGATTTTTC TGCGGGTTGG GGTGGTGGGT 
AAAAGCGCGG TGGATCTGGC CAGGGAGATG CTGCTGAATT TTGGCAGTTT GCGGGCGTTG 
CTCACTGCCT CCCATCATGA TTTTTGTGTA CATAAAGGAC TTGGGGATGC GAAATATGCC 
CTTCTGCAGG CGGTGCTGGA AATGGGCAGG CGTCATCTTG CCGAGGAATG GCAACGTGGG 
GACGGCCTTG ATTCGCCGCT GCGGGTACGA CAGTATCTGT CTGCTACCTT GCGTGACCGC 
TGCCGGGAGG TTTTTGCGGT GATCTTTCTG GATAATCGGC ACCGGGTGCT GCGTTTTGAG 
GAGATGTTCC TCGGCACTAT CGACGGCGCT ACGGTGCACA TTCGCGAAGT GCTGAAGCGC 
GCCCTCGAGC TGAATGCGGC GGCGCTCATC GTTGCGCACA ATCATCCCTC CGGTGTGGCG 
GAACCCAGCG CGGCGGACCT TTCCCTGACG CGGCGTCTGG ATCAAGCCAT GCAGCTACTG 
GACCTGCGCT TGCTGGACCA CTTCATTGTC GGTGATGGTG AGCCCTTGTC CTTGCGCGAA 
CAGGGGGGTT GGTGA 

 

Protein sequence

MAITDWPVDE RPRERLLQKG AATLSDAELL AIFLRVGVVG KSAVDLAREM LLNFGSLRAL 
LTASHHDFCV HKGLGDAKYA LLQAVLEMGR RHLAEEWQRG DGLDSPLRVR QYLSATLRDR 
CREVFAVIFL DNRHRVLRFE EMFLGTIDGA TVHIREVLKR ALELNAAALI VAHNHPSGVA 
EPSAADLSLT RRLDQAMQLL DLRLLDHFIV GDGEPLSLRE QGGW