Gene AFE_0346 details

Gene Information

• Locus tag: AFE_0346
• Symbol: rplO
• ID: 7135101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 300984
• End bp: 301421
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643528758
• Product: 50S ribosomal protein L15
• Protein accession: YP_002424849
• Protein GI: 218666698
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAA ACACCATCGC GCCCGCAGAG GGCTCAAAGA AGGACCGCCG GCGTGTTGGG 
CGGGGAATCG GCAGCGGTTT CGGCAAGACG GCCGGGCGTG GTCATAAGGG CCAGCATGCA 
CGGTCCGGAG GTTACCATAA GGTAGGTTTT GAAGGCGGGC AGATGCCTTT GCAACGACGT 
ATTCCTAAGC GTGGCTTTCG TAACACGTTG GGCGTTCGCG TCGTGGAGGT GGCGTTATCG 
CAGTTGGAGT CTGCAGCCAT TGACGGCGTG GTGGATTTGG AAGGCCTGCT ACTGCGACGC 
ATCGTTCGCG GTTCGCCCGA TGCGGTCAAG GTTATATTGA CCGGAGAAAT CACTCAGGGG 
TTGACGGTGC GTGGTCTGCG AGTCAGCGCT GGTGCCAGGG CGGCTATCGA AAAGGCCGGC 
GGAAAGGTGG AAGATTGA 

 

Protein sequence

MKLNTIAPAE GSKKDRRRVG RGIGSGFGKT AGRGHKGQHA RSGGYHKVGF EGGQMPLQRR 
IPKRGFRNTL GVRVVEVALS QLESAAIDGV VDLEGLLLRR IVRGSPDAVK VILTGEITQG 
LTVRGLRVSA GARAAIEKAG GKVED