Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0325 |
Symbol | tuf-1 |
ID | 7136844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 291387 |
End bp | 292577 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643528737 |
Product | elongation factor Tu |
Protein accession | YP_002424828 |
Protein GI | 218666143 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.275223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAG GGAAATTTGA GCGGACGAAG CCGCATGTCA ACGTGGGAAC GATTGGTCAC GTGGACCATG GCAAGACCAC ATTAACGGCG GCGCTGACGA AGGTGTTGTC GGCGAAGTTT GGCGGTGAGA TTCGCGCCTA TGATCAGATT GACAATGCGC CGGAAGAGCG GGCGCGAGGG ATCACGATAG CGACCTCGCA CGTAGAATAC GAGACCGCGA ATCGTCACTA TGCCCATGTA GACTGTCCGG GGCATGCCGA CTATGTGAAG AACATGATTA CCGGAGCGGC GCAGATGGAC GGCGCCATAC TGGTGTGTTC GGCAGCGGAC GGTCCGATGC CGCAGACCCG CGAACATATT TTGCTTGCCC GTCAGGTGGG CGTTCCCTAT ATCGTCGTGT TTTTGAACAA GGCGGACATG GTGGATGACG CCGAGCTGCT GGAGTTGGTG GAAATGGAAG TGCGCGAACT TCTGTCCAAG TACGAGTTTC CCGGTGATGA CATTCCGGTG ATTATCGGTT CGGCGCTGAA GGCCCTGGAA GGGGATCAGA GCGACATAGG GGAGCCTGCG ATTTTCCGTT TGGCGGATGC GATGGACAGC TACATCCCGA TGCCCGAGCG TCCCGTGGAC AAGCCCTTCC TGATGCCGAT AGAAGACGTA TTTTCGATTT CGGGTCGTGG CACGGTGGTG ACCGGACGTA TTGAGCGTGG CATTGTGAAG ATTGGCGATG AGATCGAGAT CATCGGCATT CACAACACCG CCAAGAGCAT TGTCACTGGT GTGGAGATGT TCCGCAAGAT TCTGGATCAG GGGCAGGCCG GAGACAACGT CGGGGTACTG CTGCGCGGCA CGAAGAAAGA TGATGTGGAG CGTGGTCAGG TACTGGCCAA GCCGGGCAGC ATCAAGCCGC ATACGCGTTT TGAAGCGGAA GTATATGTGT TGTCGAAAGA GGAAGGGGGT CGACACACGC CGTTTTTCAA TGGTTACCGC CCGCAGTTTT ACTTTCGTAC CACTGACGTG ACGGGTGCGG TGGAGTTGCC GGAAGGTGTG GAGATGGTGA TGCCGGGCGA CAATATATTG TTCAAGGTCG CGTTGATTGC GCCGATTGCG ATGGAGGAAG GTCTGCGTTT CGCGGTGCGC GAAGGCGGCC GTACCGTTGG CGCCGGCGTC GTCTCCAAGG TGGTCGAATA A
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Protein sequence | MSKGKFERTK PHVNVGTIGH VDHGKTTLTA ALTKVLSAKF GGEIRAYDQI DNAPEERARG ITIATSHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLARQVGVPY IVVFLNKADM VDDAELLELV EMEVRELLSK YEFPGDDIPV IIGSALKALE GDQSDIGEPA IFRLADAMDS YIPMPERPVD KPFLMPIEDV FSISGRGTVV TGRIERGIVK IGDEIEIIGI HNTAKSIVTG VEMFRKILDQ GQAGDNVGVL LRGTKKDDVE RGQVLAKPGS IKPHTRFEAE VYVLSKEEGG RHTPFFNGYR PQFYFRTTDV TGAVELPEGV EMVMPGDNIL FKVALIAPIA MEEGLRFAVR EGGRTVGAGV VSKVVE
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