Gene AFE_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0306 
Symbol 
ID7134634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp274144 
End bp274797 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content57% 
IMG OID643528718 
ProductOmpA family protein 
Protein accessionYP_002424813 
Protein GI218667641 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000558154 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATA TTAAAGGCAT CAAAGGCATC ACACTACTTG TAGCCATCAG CGGGGGTATT 
TTCGCCAGTG CAGCCTATGC GGACGGTGGC TATGTGGGTT ATGCAGTCAA TCACGGCGCC
AAGCCTGTTG TCACCAGTCG GGGTATCTGC GTGCGTGGCG GGCGTCCGGT AACGGATGGT
CCGGTGCCCG CCTATTGTGC GCCCGCGCCG GTCGCCGTGG CAGCCGCGCC GACACCGCCT
CCAGCCCCTG TACCTGCCCC CATCGCGCCT GTTGAGCAGA CGATTCTGGT GAGCAAGCCG
ATCACCATCA CCGGTATCAA CTTCAAGTTC GATTCGTACA AGCTGCTGGA TCATGACATC
CGGGTACTGG ACGAAGTGGC GAGTTTTGCC AAAAAACATC CCGAGGCCGT ACTCGACGTC
AATGGATATT GCAGTAAGGT GGGCACCTAC GCATACAATC TCAAGCTGTC CAAGCTGCGT
GCCCAGAGTG TCGCACAGTA CCTGGCCCAT CACGGGGTGG CAAGTGATCG CATGGTACTG
AAGGGTCACT CCTACGACAA TCCGGTCGCC ACTAACGCTA CCCCCCAAGG CCGCTTCCTG
AATCAGCGCG TGGAAATCAA TTCCAGCATC AAGGTTCAGA AGACCGTTCA GTAA
 
Protein sequence
MEHIKGIKGI TLLVAISGGI FASAAYADGG YVGYAVNHGA KPVVTSRGIC VRGGRPVTDG 
PVPAYCAPAP VAVAAAPTPP PAPVPAPIAP VEQTILVSKP ITITGINFKF DSYKLLDHDI
RVLDEVASFA KKHPEAVLDV NGYCSKVGTY AYNLKLSKLR AQSVAQYLAH HGVASDRMVL
KGHSYDNPVA TNATPQGRFL NQRVEINSSI KVQKTVQ