Gene AFE_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0303 
Symbol 
ID7137286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp271364 
End bp271936 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content56% 
IMG OID643528715 
Producthypothetical protein 
Protein accessionYP_002424810 
Protein GI218665158 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.921307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATT ATCACGATTT CAGTAAACGA TTCCTTCCTG CTGTCTGTGG GGCAGTATTT 
TTGGCGCTTT CCGCGCCTTG GGCGGATGCG CATACCGCAA CCGGTGTAGC CCCCCAAGAT 
GTGGCTGGCG CTCACTCTGC CGATCTCACC ACGGCCAGGC TCGAGAATAC GATAGGTACT 
CGTTGTGCAT TGGGTGACGG GGTTCCGCAA AATTATAGCT TGGCTGCACA TTGGTTCAAC 
AAGGCTGCCC TCCATGGCTA TGCCAAAGCG GAATACAACC TTGGCATGCA GTATTATTTC 
GGCCAGGGCG TGAACAAGGA TGAAGCCAAA GCAGCTTACT GGTGGAAGAA GGCGGCAGCG 
CAGGGTATTC CCGCCGCTCA GTACAACCTG GGCAATCTCT ATTTCCTGGG GCAGGGGGTG 
CCGCAGGACT ATGGCCAGGC CAGCCTCTGG TGGCGCAAAG CAGCAGCGCT TGGCAATGTT 
CAAGCCAGCC GTAACCTGGC GACTTTAGCG CAAGTACACC CAGAGTACCG GGAGGTGGCT 
GCTGTTAGGG AAAAGACGGT AGTTGCACCA TGA
 
Protein sequence
MRNYHDFSKR FLPAVCGAVF LALSAPWADA HTATGVAPQD VAGAHSADLT TARLENTIGT 
RCALGDGVPQ NYSLAAHWFN KAALHGYAKA EYNLGMQYYF GQGVNKDEAK AAYWWKKAAA 
QGIPAAQYNL GNLYFLGQGV PQDYGQASLW WRKAAALGNV QASRNLATLA QVHPEYREVA 
AVREKTVVAP