Gene AFE_0299 details

Gene Information

• Locus tag: AFE_0299
• Symbol: ribBA
• ID: 7134022
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 268748
• End bp: 269881
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643528711
• Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II
• Protein accession: YP_002424806
• Protein GI: 218665266
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase; [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGTG CCAGTATAAG TTCCGCAGAG GAGATCATCG CCGACATCGC TGCCGGTCGG 
ATGGTGATTC TGATGGACGA CGAGGGGCGT GAAAACGAAG GTGATCTGAT CATGGCGGCG 
GAGTTTGTGA CGCCCGCCGC CATCAATTTC ATGGTTTCGC AGGGGCGTGG TCTGGTGTGC 
CTGCCGCTCA CCCGCGAGCG TTGCGAGCGA TTGCGCCTCC CGCAGATGGT AGGGCATAAC 
ACTGCCAGCC TGGGCACCGC GTTCACGGTG TCGATTGAGG CTGCCCGCGG TGTCACCACG 
GGCATTTCCG CTGCTGACCG CGCGGTGACG ATTCGGGCGG CCATTGCAGA CGAGGCAGGC 
CCGGAGGATA TCGTGATGCC CGGTCACATT TTCCCTCTGG CCGCAGAACC CGGGGGCGTA 
CTGGTTCGCG CCGGTCATAC CGAAGCAGCG GTCGACCTTG CACGGCTGGC TGGCTGCAAA 
CCCGCCGGTG TCATCTGCGA AATTCTCAAT GTCGACGGCG AAATGGCGCG TTTGCCCGAC 
CTGCTCCCCT ATGCTGCGGA ACATGGCCTC AAAATTGGCA CCATTGCCGA CCTGATCCGC 
TATCGCCTGG AACGGGAGCG GATCGTACAG CGGGAGGCGA GCGGCCCGTG GCATACCCCA 
TGTGGCGACT TCGAACTCCA CGTTTATCGT GACTGGGTCG CCCGTGAAAC GCATTTTGCC 
CTGGTTCTTG GCGACCTGGA AGCGCGTGAT GAACCCGTAC TGGTAAGGGT ACAGGTTGGC 
AAGACGCTGA ATGATCTCTT CGCCGGTGAA GCCAGCCCGA ATGTCATCGC CTTGCGGCGG 
ATCGCTGCAG AAGGTCGTGG CGTGCTGGTC TATCTCCACC ATCAGGAGAG TGTCGAAGAA 
CTCCTGCGCG AGATCGCCGC ATTGCCTGAA AAGCCCAAGG GGCCCGGTCA GGCGGGTGAC 
GCCGGACGGG TTCTGCGCAC CTTTGGCATC GGCGCCCAGA TTCTCTCTGA TCTGGGGGTG 
CATCAGGCGG TGGTCCTCAG CGACAGTCAG TTTCAATACC GTGGTATCGG CGGCTTCGGT 
CTGGAGATCG TCGGCCAGCG TCCCTTTCTG GAAGTTCCCG AGGATGAGTC ATGA 

 

Protein sequence

MSSASISSAE EIIADIAAGR MVILMDDEGR ENEGDLIMAA EFVTPAAINF MVSQGRGLVC 
LPLTRERCER LRLPQMVGHN TASLGTAFTV SIEAARGVTT GISAADRAVT IRAAIADEAG 
PEDIVMPGHI FPLAAEPGGV LVRAGHTEAA VDLARLAGCK PAGVICEILN VDGEMARLPD 
LLPYAAEHGL KIGTIADLIR YRLERERIVQ REASGPWHTP CGDFELHVYR DWVARETHFA 
LVLGDLEARD EPVLVRVQVG KTLNDLFAGE ASPNVIALRR IAAEGRGVLV YLHHQESVEE 
LLREIAALPE KPKGPGQAGD AGRVLRTFGI GAQILSDLGV HQAVVLSDSQ FQYRGIGGFG 
LEIVGQRPFL EVPEDES