Gene AFE_0298 details

Gene Information

• Locus tag: AFE_0298
• Symbol: ribE
• ID: 7134773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 268095
• End bp: 268751
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643528710
• Product: riboflavin synthase, alpha subunit
• Protein accession: YP_002424805
• Protein GI: 218666123
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACCG GTATCATTCA GGCCTTGGGC CAGATTCGCG GGATGCAGGC ACGGGATGGC 
GACCTGCGGA TGATCGTTGC CGCCGGAAGA CTGGATCTCG CAGATGTCGG GTTGGGCGAC 
AGCATTGCGG TTTCCGGCGC CTGCCTGACG GTGGTGGAAG TCCAGCGCGA CGCCTTCGCC 
GTCGATGTCT CCCGCGAAAC CCTCAATAAA ACCATTCTTG GACGTCTTCA GGTGGGCAGT 
CCGGTCAATC TGGAAAAGGC CCTGCGACTG GCAGATCGCC TGGGAGGGCA TCTGGTCGCT 
GGCCATGTGG ACGGTGTCGG ACAGATTCGC GAAGTGAGCG CCTCGGGACG CTCGCAGGTA 
TTTGCCATCG CCGCACCTCC GGACCTGCTA CGCTATGTTG CCGCCAAAGG CAGCGTCTGT 
GTGGACGGTA TCAGCCTGAC CGTCAACGCG CTTCGAGGCG ACCTGTTCAT GCTCAATCTC 
ATCCCCCACA CCCTGGCGCA GACGACGGCC GCGCAGTGGC GGCCGGGGCA GTCCGTCAAT 
CTGGAGGTGG ACCTCATTGC ACGCTATCTG GAACGCTGGG TGGCCACAGG CCCCGGGTCC 
GGGTTAAAAT CAGCAGTCGA TCGCGATTCA CTCGCCGCAA AAGGGTTTCC GGTATGA 

 

Protein sequence

MFTGIIQALG QIRGMQARDG DLRMIVAAGR LDLADVGLGD SIAVSGACLT VVEVQRDAFA 
VDVSRETLNK TILGRLQVGS PVNLEKALRL ADRLGGHLVA GHVDGVGQIR EVSASGRSQV 
FAIAAPPDLL RYVAAKGSVC VDGISLTVNA LRGDLFMLNL IPHTLAQTTA AQWRPGQSVN 
LEVDLIARYL ERWVATGPGS GLKSAVDRDS LAAKGFPV