| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0292 |
|---|
| Symbol | metW |
|---|
| ID | 7135707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 262402 |
|---|
| End bp | 263007 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643528704 |
|---|
| Product | methionine biosynthesis protein MetW |
|---|
| Protein accession | YP_002424799 |
|---|
| Protein GI | 218666620 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR02081] methionine biosynthesis protein MetW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGC GTAAGGACCT GGCGATTATC GCCGACTGGA TTGCACCCCG AAGCCGTATC
CTCGATCTGG GTTGCGGGGA AGGCGAACTG TTGGCTTACC TGCGTGCCGA AAAAGGTGTG
CAGGGCTATG GCGTGGAAAT CGAGGAGGCG AGGGTGGTGG CGGCCATACG CCGCGGCATA
CCGGTGATTC AGCAGGATCT CGATCAAGGT TTGCGCAATT TTGCCGATCA AAGCGTCGAT
ACGGTAGTCC TTTCCCTGAC CCTGCAAGCG ACCACCTACC CGCGCGAACT GCTGCTGGAG
ATGCTGCGGG TGGGACGAGA GGTCATCGTC ACCTTTCCCA ACATGGGGCA CTGGCACGCG
CGCTGGCAAC TGGGCATCCG TGGCCGCATG CCCATGACGG ATGTTTTGCC CCATACGTGG
TACGATACGC CGAATATCCA TCTGTGTACG ATCCGTGATT TCGAGTCGCT GTGCCATGAT
AACGGGATTG CCGTCCATCA GCGGGTCGTG CTGAACGATC TGCGTCGCGA AACCTGGCGC
AACCGCTTGT TGCCCAATCT TTTCGGCGAG GTCGCCCTCT ATCGTTGCGC TCTGATGGTG
CGCTGA
|
|---|
| Protein sequence | MTLRKDLAII ADWIAPRSRI LDLGCGEGEL LAYLRAEKGV QGYGVEIEEA RVVAAIRRGI
PVIQQDLDQG LRNFADQSVD TVVLSLTLQA TTYPRELLLE MLRVGREVIV TFPNMGHWHA
RWQLGIRGRM PMTDVLPHTW YDTPNIHLCT IRDFESLCHD NGIAVHQRVV LNDLRRETWR
NRLLPNLFGE VALYRCALMV R
|
|---|
| |