Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0263 |
Symbol | |
ID | 7134789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 237122 |
End bp | 237790 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643528675 |
Product | conserved hypothetical protein TIGR00044 |
Protein accession | YP_002424770 |
Protein GI | 218665726 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.456825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATCG CTGAACGCCT AGCCCATGTG CAAGGGGAGA TTGCCGATCA CCCGCCGCAG TGCCTGCTGG CGGCCAGCAA GCACGTTACG GCGGCGACAC TGCGTGACGC CTATGCGCTC GGACTTCGCC ACTTCGGCGA AAACTTCCTG CAGGAGGCCC TGGACAAACA GACGGCACTG AGAGATCTGG ATGGCATCAT CTGGCATTTC ATAGGTCGCA TCCAGCGCAA CAAGACCGCA CTACTGGCCC GGCATTTCGA CTGGGTAGAA AGTGTGGACC GCCCACTCAT CGCGGAACGG CTCCATGCCG CCCGCGCCGG CATGGAGCCG TTGAATGTGC TGATCGAAGT CGCCATCAGT GGGGAGGAAA CCAAGGGCGG CTGCGCGCCA GAAGACGTTC CGGAATTGGC CCTCGTCATT TCCCGGTTGT CCCATTTACG GCTCCGCGGT CTGATGGCCC TGGTCCACCC GCAACCGGAG CTGGCAGAGG CCGACTTCCG CCGGATGGCA GAACTTTTTC TCGCGCTGCG GCAGACCCAG GTCCATGCCG ATCTGGATAC CCTCTCCATG GGCACTTCGG CGGATTACCT CCAGGCCCTG CAGCAGGGTG CCACAGAAAT CCGTCTTGGT ACCATCCTCT TCGGAGCCCG TGCCCAGGAG CCCTTATGA
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Protein sequence | MSIAERLAHV QGEIADHPPQ CLLAASKHVT AATLRDAYAL GLRHFGENFL QEALDKQTAL RDLDGIIWHF IGRIQRNKTA LLARHFDWVE SVDRPLIAER LHAARAGMEP LNVLIEVAIS GEETKGGCAP EDVPELALVI SRLSHLRLRG LMALVHPQPE LAEADFRRMA ELFLALRQTQ VHADLDTLSM GTSADYLQAL QQGATEIRLG TILFGARAQE PL
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