Gene AFE_0251 details

Gene Information

• Locus tag: AFE_0251
• Symbol: rnt
• ID: 7135299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 227592
• End bp: 228197
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643528663
• Product: ribonuclease T
• Protein accession: YP_002424758
• Protein GI: 218667091
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
• TIGRFAM ID: [TIGR01298] ribonuclease T

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCTT TGGCCGGACG GTTTCGCGGC TTTTTGCCGG TAGTGGTCGA TGTGGAAACG 
GCAGGATTTG ACTCTGAACG TAATGCGCTG CTGGAAGTGG CTGCGATCAT CATCGGTGGC 
GAAGTGGGGC AGTTGCGGCC CGTAGCCACC CACCACTTTC AGGTCCAGCC CTTTGCCGGG 
GCGGTGCTTG ACCCGGCAGC GCTGGCGTTT ACGGGTATTG ATCCCTTTCA GGCACTGCGC 
GGCGCTGTTT CCGAGGAGGA AGCCCTGCGC GGGATTTTCA GGCCGGTGCG CACTGCCGTA 
AAGGTGGCTC AATGCCGACG TGCCATTCTC GTGGGGCACA ACGCCGCTTT TGACCTGTCC 
TTTATCAAGG CCGCAGAAAA ACGGACCGGC GTCAAGAATA ACCCCTTTCA TCTTTTCAGT 
ACCTTCGACA CCGTTAGTCT GGCCGGACTG GCCTATGGTG AGACCGTGCT GGCCAAGGCT 
GCCCTGGCAG CCGGCCTGGA CTGGGATCAT ACCCAAGCCC ATTCGGCACT CTATGATGCG 
CGCCAGACGG CGGAATTGTT CTGCCGGATC GTGAATCGCT ACGATCTCAA CCGGGAGTAT 
CCGTGA 

 

Protein sequence

MAALAGRFRG FLPVVVDVET AGFDSERNAL LEVAAIIIGG EVGQLRPVAT HHFQVQPFAG 
AVLDPAALAF TGIDPFQALR GAVSEEEALR GIFRPVRTAV KVAQCRRAIL VGHNAAFDLS 
FIKAAEKRTG VKNNPFHLFS TFDTVSLAGL AYGETVLAKA ALAAGLDWDH TQAHSALYDA 
RQTAELFCRI VNRYDLNREY P