Gene AFE_0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0241 
Symbol 
ID7136711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp219457 
End bp219972 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content61% 
IMG OID643528653 
ProductRNA methyltransferase, TrmH family, group 2 
Protein accessionYP_002424748 
Protein GI218666125 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAGT CATTTTTGCA CGTCATCCTG TATGAGCCGG AAATACCCCC CAATACCGGC 
AATATCATCC GCCTTTGCGC CAATACCGGA GCCACCCTGC ATCTCGTCGA GCCTTTGGGC
TTCGCCTGGG ATGACCGCCG CCTGCGCCGC GCCGGGCTGG ATTACCACGA ATTTGCGCAA
GTGCATCGCC ATGCGGACTG GGCGAGCTGC CGGGCATTTT TAGGCGATGC GCATGTCTTT
GCATTCAGCA CCAAGGGAAC GCAGTTCTAT CACGACGTTG CGTACCAGCC CGGCGACGCG
CTGCTTTTCG GCCCGGAGAC CCGCGGCTTG CCTGCCCACC TCCTGAACAG CCTGCCCGCC
AGGCAGGTAC TGCGCCTGCC CATGCGCTCC GGCCAACGCA GCCTGAATCT GTCCAACGCC
TGTGCTGTCG CCGTCTTCGA GGCCTGGCGG CAGATGGACT ATTGCGGTGG TCTACATTCA
CCCCGGGGCA CAGGATCAGA TGGTATCCTG TGGTAA
 
Protein sequence
MLESFLHVIL YEPEIPPNTG NIIRLCANTG ATLHLVEPLG FAWDDRRLRR AGLDYHEFAQ 
VHRHADWASC RAFLGDAHVF AFSTKGTQFY HDVAYQPGDA LLFGPETRGL PAHLLNSLPA
RQVLRLPMRS GQRSLNLSNA CAVAVFEAWR QMDYCGGLHS PRGTGSDGIL W