| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0235 |
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| Symbol | rfaC |
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| ID | 7135039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 212157 |
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| End bp | 213209 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643528647 |
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| Product | lipopolysaccharide heptosyltransferase 1 |
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| Protein accession | YP_002424742 |
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| Protein GI | 218667929 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTC TGCTACTGCG CCTCAGTTCC ATGGGCGACG TGCTGCATAC CCTGCCCGCG
GTGACGGATA TGTGGCAGGC CCGCCCGGAT CTATGCTTAC ACTGGTTGGT TGAGCCCGCA
TTCGCGCCCA TCGCCCAGTT GCATCCCGGG GTCACGCGGG TGATCCCCTT CTCTCTGCGC
GTGCATAAAG AACGGTGGCG AGGCTTGGCG GCTGCGCTGC GGGACTTACG CCGGAGTCTA
CGGAGCGAGC GTTACGAGCA CATTCTCGAC GCCCAGGGCC TCTACAAAAG CGCCTTGCTG
GGGCGTCTGG GTGGTTCGCC CCTGTGGGGT CTGGATGCCG CCAGCGCCCG CGAACCGGGT
GCCAGCCGGC TTTATCATCG CCGGTTTCGC GTGGCCTGGG GACAGCCAGC CATCAGTCGG
AATCGCCAGC TGTTCGCACA GGCTTTGGAC TATCCCTTAC CGGAAACGCC GTCAGATTAT
GGTTTGCAGG TGGCTGCCGC GCGCCTGCGT AAAGACACAC TGGCGCAGCC TTGGGGTGAA
CTGGTGCAGC AGCCCTTTGT GCTGGGTTTT CACGGAACCT CGTGGGAGAA CAAGGAGTGG
CGGGAAGACT ATTGGCGGGC ATTGGCCACC CCCCTGAAGC AGGCGGGATT GCGCTTGTTG
CTGCCCGCAG GCAGTGCGCG CGAGGCGGCG CGCGCCCGGC GCATTGCGGA ACAAGCGGAT
AATGTGGTCG CCCTACCCCC CGCCACGTTG CTGGAGCTTG CCGCCTTGAT CGTGCGGGCT
GATGCCTATG TCGGTATGGA TACAGGCCTT TCTTATCTGG CCGGTGCCCT GGGTCTGGCG
GGGGTTACTT TGTACGGACC AACGGCCAGC GGGCGGTTTT CTGTGGCAGA GAGCCGTCAG
GCCACCCTGC AAAGTTCCGA GCCTTGCTCT CCTTGCGGTA AATCCCGATG CGCGTTGCCG
GAAGCGAAAA ATGGCCTGAT AGTCTGCCAG CAGTCCTTGC GCCCGGAGCA GGTCTGGACG
GCCTTATCCC CTTTGCTGGA GCACCGATCA TGA
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| Protein sequence | MKILLLRLSS MGDVLHTLPA VTDMWQARPD LCLHWLVEPA FAPIAQLHPG VTRVIPFSLR
VHKERWRGLA AALRDLRRSL RSERYEHILD AQGLYKSALL GRLGGSPLWG LDAASAREPG
ASRLYHRRFR VAWGQPAISR NRQLFAQALD YPLPETPSDY GLQVAAARLR KDTLAQPWGE
LVQQPFVLGF HGTSWENKEW REDYWRALAT PLKQAGLRLL LPAGSAREAA RARRIAEQAD
NVVALPPATL LELAALIVRA DAYVGMDTGL SYLAGALGLA GVTLYGPTAS GRFSVAESRQ
ATLQSSEPCS PCGKSRCALP EAKNGLIVCQ QSLRPEQVWT ALSPLLEHRS
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