| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0231 |
|---|
| Symbol | |
|---|
| ID | 7136937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 207671 |
|---|
| End bp | 209062 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643528643 |
|---|
| Product | dolichyl-phosphate-mannose-protein mannosyltransferase family protein |
|---|
| Protein accession | YP_002424738 |
|---|
| Protein GI | 218665054 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAA CGAACACCAG AAACTACTGG CTGCTTTTCG CTCTCGCCGC GGCCAGCTTC
GTCTTTACCT TCCATAACGT TCAGTATACC GGTGAAGAAG CGGTTTATCC GCTCATGTCC
TATGAAATGT GGTATCACGG CCATCTGCTC ACCCCAGTCA TGTACGGACA GGACTATTGG
CGCCCGCCCC TGGATAATTG GCTCATCACC ATGGTGTCCA TGTGGATTGG CTGGTCTCAC
ATGCTGGTTG CGGCACGATT GATCGCGGCT TTGGCGACGG TGGGTTCCGG ACTGCTCGTG
GGATGGTTCG CAGGAAGAAT CTGGAAGGAA AGGAGGTTGG CTGCTTTCGC TGCCTTGGTG
TATATCACCC TGGGGGACGT GCTCTTTTAC GATGGCTGGC TGGCGTATAG TGACCCGCTG
TTCGCCTTTT TCTGTTTGGC GGCCATGCTT CTCGGGTGGC TTGCGGTGAT GGAGCGGCGT
GTTGGCTTCT TCGCTATTGC CGTGCTGGCG TTGTCTTGTG CGTTTCTTAC CAAGGCTCTG
ACCGTCTACG TATTTTACGG TGTGGCGGTA TTGGTGGTGA CCTACCGAAC CCGTGGCTGG
CGTTTTTTGT TTTCGTGGCC TTCCTGGGGC ATACATCTTC TGGCGTTGGT GGTCCCCGTC
CTCTGGTATG CCATGGCCCC TGCCGGCGGC ACCATGGCCC ATGGAATGTT CGACGACATC
ATCGGCAAGT TGCAGGGACA GGGATTGCTG GATTACCTGC ATCAGTTTTT CGTCTTCCCT
GCGCAGACTT TCGGGCAGTT GCTTCCGGTC GGAGGCGTCG TGTTATATGC CCTGTTGCGC
CGTTATCCGA TTTCCCGTAT GAACGATCCG CAGGTGCGGA CGGCTCTATG GATAGCGGGA
GTGAATTACC TGCCCTATTG GCTATCGCCG CAAAGTGGGA TCCGTTACCT GATGCCGCTC
TATGGAATCG TGGCACTGGT GTTGGCGGGG TGGGTCGTTG ATGCCGAAAA GACACGGCGT
TTGGCCGTGA AGTGGATGAT GGCAGCCATC CTTCTCAAGT ATTTTTTCGC TCTATGGGCC
TTTCCCGCGT ATACCGATCG GTTCCGCCCG CATATCAGCG CCATAGCGCG GGATGTGCTC
ATGCAAACCC ATGGGGCGCC CCTCTATGTT TCGAACGCTG CATGGGTAGG TATCGGCGTG
ACAGCCGACA TTGATCTGGC GATAAGGCCG CATCCTCCAC TGGTAACGCC GCCATCCAAT
TTGGCCAACG GCTTCGTCAT CAGCTACCCT GGGGCGGTGC CGCCAGGCTA TACCGTTGTG
TCACGGTATC AGGGTGTGTG GCTGCTATGT CGCGGCACGG TTTGCGGCCA GAAGGACAGA
AGCCATGAAT GA
|
|---|
| Protein sequence | MTTTNTRNYW LLFALAAASF VFTFHNVQYT GEEAVYPLMS YEMWYHGHLL TPVMYGQDYW
RPPLDNWLIT MVSMWIGWSH MLVAARLIAA LATVGSGLLV GWFAGRIWKE RRLAAFAALV
YITLGDVLFY DGWLAYSDPL FAFFCLAAML LGWLAVMERR VGFFAIAVLA LSCAFLTKAL
TVYVFYGVAV LVVTYRTRGW RFLFSWPSWG IHLLALVVPV LWYAMAPAGG TMAHGMFDDI
IGKLQGQGLL DYLHQFFVFP AQTFGQLLPV GGVVLYALLR RYPISRMNDP QVRTALWIAG
VNYLPYWLSP QSGIRYLMPL YGIVALVLAG WVVDAEKTRR LAVKWMMAAI LLKYFFALWA
FPAYTDRFRP HISAIARDVL MQTHGAPLYV SNAAWVGIGV TADIDLAIRP HPPLVTPPSN
LANGFVISYP GAVPPGYTVV SRYQGVWLLC RGTVCGQKDR SHE
|
|---|
| |