Gene AFE_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0223 
SymbollpxC 
ID7137238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp198276 
End bp199190 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content58% 
IMG OID643528635 
ProductUDP-3-0-acyl N-acetylglucosamine deacetylase 
Protein accessionYP_002424730 
Protein GI218667627 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.829686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGTC AGCGTACACT TAAGAACATG ATCTGGGGTA CAGGAATCGG TTTGCACAGT 
GGCAAGAAGG TCTACATCGG CCTGCGCCCG GCACCTGTAA ACACGGGGAT CGTATTCCAC 
CGCAGCGATA TCGAGGGTGG CGCCTGGATC AAAGCGGACC CGCTCCATGT GGTGGATACC 
CGCCTTTCCA CCAATATCGG CGATGGCCAT ATCCGGGTTG GCACCGTTGA ACACCTGATG 
TCGGCCTTGG CGGGTCTTGG TATCGACAAT GCCTATGTGG ATCTCGACGG ACCCGAAGTG 
CCCATCATGG ATGGTAGCGC TGCGCCCTTC GTATTCCTCA TCCAGTGCGC GGGGATTGAA 
GAGCAGAATG CCCCGAAGCG ATTCATCCGC ATCACCAAAC CGCTCAAGGC GGAAGATGGC 
GATCGCTGGG TACAACTGGA GCCATTCGAA GGCTTCAAGG TGAGTTTCGC CATCGATTTC 
GACCATCCGG TGATGAAAAA CGGCGGTCAG GAGGTGACGG TGGACTTTGC CCGCACTTCT 
TACCTCAAGG AAGTGGCCCG TGCGCGAACC TTCGGCTTCA TGCGCGAAGT CGAAGCGTTG 
CGGCGGATGG GCTTGGCCCT CGGCGGCAAT CTGGACAACG CTATCGTGGT CGACGATTAC 
CGTGTGCTCA ACGAAGAAGG GCTGCGCTAC ACCAATGAGT TCGTGCGCCA TAAGGTGCTG 
GATTCCATAG GTGATCTCTA CCTGCTCGGG CATCCGCTGG TCGGCCATTT TTCCGGACAC 
AAGGCCGGAC ACGCCCTCAA CAACAGTCTG CTGCGGGCGC TGCTTCTCCG TCAGGACGCC 
TGGGAGTTTG TGGATTACGC CGAGCGGCGT GCGCCGTTTT CCTTTGCCGA CACCTTGGTG 
ACGGCCTCCG CCTGA
 
Protein sequence
MIRQRTLKNM IWGTGIGLHS GKKVYIGLRP APVNTGIVFH RSDIEGGAWI KADPLHVVDT 
RLSTNIGDGH IRVGTVEHLM SALAGLGIDN AYVDLDGPEV PIMDGSAAPF VFLIQCAGIE 
EQNAPKRFIR ITKPLKAEDG DRWVQLEPFE GFKVSFAIDF DHPVMKNGGQ EVTVDFARTS 
YLKEVARART FGFMREVEAL RRMGLALGGN LDNAIVVDDY RVLNEEGLRY TNEFVRHKVL 
DSIGDLYLLG HPLVGHFSGH KAGHALNNSL LRALLLRQDA WEFVDYAERR APFSFADTLV 
TASA