Gene AFE_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0197 
SymbolaroQ 
ID7134995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp173439 
End bp173900 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID643528611 
Product3-dehydroquinate dehydratase 
Protein accessionYP_002424706 
Protein GI218666812 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAT CCTCTCCTCA TGTCCTTGTA CTGCATGGCC CGAATCTGAA TCTGCTGGGC 
AGTCGTGAGC CCGGCCATTA CGGGCAGACC ACCCTCGCCG AGATCGATGC CGGGATGCAG
ACACTCGCGC AGGGCTGGGG CTGGCGACTG CACAGTCTGC AGAGCAACGC TGAGCATGTA
CTGATCGATG CGGTCCAGGA GGCCCTCCCC CTGGGCGTCA CCGACATCAT CATCAATCCC
GCGGCATTCA CCCACACCAG CGTTGCCCTG CGTGATGCCC TGGCTGCCGT CCAGATTCCG
TTTATCGAAG TACATTTATC CAATATTCAT GGTCGGGAAC CCTTCCGCCG TCACTCCTAC
TTCTCCGAGC TCGCCCAGGG CGTCATCGCG GGACTGGGTG CGGATGGATA CTTCCTGGCG
CTGGATGCCA TTCATCGGCG CATGAAACGC CATAACCCAT AA
 
Protein sequence
MAASSPHVLV LHGPNLNLLG SREPGHYGQT TLAEIDAGMQ TLAQGWGWRL HSLQSNAEHV 
LIDAVQEALP LGVTDIIINP AAFTHTSVAL RDALAAVQIP FIEVHLSNIH GREPFRRHSY
FSELAQGVIA GLGADGYFLA LDAIHRRMKR HNP