| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0184 |
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| Symbol | |
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| ID | 7135982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 162300 |
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| End bp | 163892 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643528598 |
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| Product | sensor protein PilS, putative |
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| Protein accession | YP_002424693 |
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| Protein GI | 218665404 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGACT GGCGGCGACT TTGGGGCATC TCCGCCTATC GGTTGCTGAT CGCGGCCGCC
ATCGCCATCC TGGTGCGCTT ACCGGCCAGT GAAACCATCA TCGATCTGGG AGGGCATGCC
GAACTGCTGC ACATCCTGAC CTTGGTGGCC GCCTTGGTCA GCCTCGTCTA CCTGCTGGGA
CTGCTGTTGC GATGGCCGAC ACAACCGCGC CGCCACGCCT GGATTCAGGT ATCGACGGAC
ACCCTGCTGG TGCTGCTGCT GCTGCATTTC GGTGGCGGTG TCAGCGGTCC CTTCAGCATC
CTGCCCTTTC TGCTGCTGGT ATCCACGGCA AGTCTCCTGC GCGGCAAAAG CGCTTTTGTT
TTCGTGTGGA TATTGCTGGC GCTGCTGGTA GGTGAGTCGC TATTCGGCGG GATGACCGCC
GTGCATCCGC CCCTCGGTCA GCTTTTCATT TATCTCCTCG CACTGGTAGC GGTGGCGGTA
CTGGCCGACA GTCTGGTGGC GAGTCTGGAA CGTGGCAACC GTCTGGCGCT GCAAAGGGAT
GCAGAGGTCG TCAATCTGAA TGCGTTGAAT CAGGAAATCG TGCAGCATAT GGATGTGGGC
GTTTTTGTGC TGGATCGGCA AAGTCGCGTG GTGCTCAGCA ACCCCGTGGC ACGGATGCTT
TCGGGTTACC GGAAATGGAC CTCCAGGCCT ATCGCCATCG GCGTAGTGCA GCCGCGTCTG
GCCATGATGC TACGACAGGC CGCGGCCAAC GACAGCGAGA TGGTGATCAC GACAAGCGGG
CGTGACCCAA CTCTGCAGGA CAGCGCCCTG ACCCTGCTGG TGCGCAGGAT CGCCCTGCCC
GACAGCTCCT ACCGGCTGCT CCTCCTCCGT GATGCATCCG CACTGCGTGC CCGGGAACGA
GAAGCGCAAC TGGCGGCGCT CGGTCGTCTG GCGGCCAATA TCGCCCATGA GATCCGTAAT
CCTCTCAGCG TGATTCGCCA CGCCGGCAAC CTTCTCGCTG AGCGCATGGA CGACCCCGCT
TCACAGCATC TTTTGGATAT TCTGGAACGG GAGACGGTAC GCATCAATGC CATCGTCGAA
TCGGTGCTGG AGATGGCCCG TCCGAGTCCG GCACATTCCG AACCCATTTC CTTGCGGAGC
TGGTTACCGA TGCTCACTGC CCAGTTGCAG GCGGATCCAT TGTTGGCACC CATGAGCATT
GTCATCGGTG AAATCTCGCC GCAGCTTACG GTTTATGCCG ATCCCGCGCA GTTGCGGCGG
GTGTTCTGGA ATCTGCTGCA TAACAGTGCG CAGTACGGCG TGGCGGAAGA TGCTACGATG
CGTGTCGAAA TCGATGCCGT CCCCGAGGAC GAAGGGAGCA TCATGGTGAC GCTGCGGGAT
TTTGGACCGG GCGTAAAGGC GGAAGTGATG GAGCGCATTT TTGAGCCGTT TTTTACCACC
AACCCCCGAG GTACCGGGCT GGGTTTATCC ATGGTGCGGG AACTGCTGCG CATCAACGAC
GGGCGCATAA CCTGTGAAAA TCACCCGCAG GGCGGCGTAC TGTTCCGGAT TTTTCTGCCC
CGCAGGGGGT GGGCGGAGAG GCGTGATGGC TGA
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| Protein sequence | MGDWRRLWGI SAYRLLIAAA IAILVRLPAS ETIIDLGGHA ELLHILTLVA ALVSLVYLLG
LLLRWPTQPR RHAWIQVSTD TLLVLLLLHF GGGVSGPFSI LPFLLLVSTA SLLRGKSAFV
FVWILLALLV GESLFGGMTA VHPPLGQLFI YLLALVAVAV LADSLVASLE RGNRLALQRD
AEVVNLNALN QEIVQHMDVG VFVLDRQSRV VLSNPVARML SGYRKWTSRP IAIGVVQPRL
AMMLRQAAAN DSEMVITTSG RDPTLQDSAL TLLVRRIALP DSSYRLLLLR DASALRARER
EAQLAALGRL AANIAHEIRN PLSVIRHAGN LLAERMDDPA SQHLLDILER ETVRINAIVE
SVLEMARPSP AHSEPISLRS WLPMLTAQLQ ADPLLAPMSI VIGEISPQLT VYADPAQLRR
VFWNLLHNSA QYGVAEDATM RVEIDAVPED EGSIMVTLRD FGPGVKAEVM ERIFEPFFTT
NPRGTGLGLS MVRELLRIND GRITCENHPQ GGVLFRIFLP RRGWAERRDG
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