| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0183 |
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| Symbol | |
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| ID | 7134301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 160451 |
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| End bp | 162160 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643528597 |
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| Product | type IV pilus assembly protein |
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| Protein accession | YP_002424692 |
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| Protein GI | 218668163 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACAA ACCCGGAACA CATCTCGTTA ACACCAGTAT TGCGGGCACT CGTCAGTAAC
GGTTTAAGCG ACGAGGCGCG CTTGCAAAGC CTTGCCGCCG ATCCGGCCCG CGGTAAGACG
CCGCTGCTGT TTTATGTGGT TGAGAAGGGC GCCGTCCCGG CCGCGGTGCT CATGGCGCAC
CTTTCCGCGC GCTACAACAT GCCCATGCTC GATCTCGACG CAGCGGTGAT CGATGCGTTG
CTCATCCGCA AGCTCGACAA AGGGCTGATG ACCCGCTATC TGGTGCTGCC CTTATCGAAG
CATGGGGACA CCCTCTACCT CGCCATGGCC GATCCCACGG ACTTCAAGGC GGTGGAGGAT
GTGAAATTTA ATTCCGGTTT GCAGGTGATG CCGGTGCTGG TCGAGGCCAA TAAACTGGTC
AAGGCGGTAC ATGCTGCGGT CAACAGCTTG CAGGGCGGGA TCGACGACGT ATTCGTGGAT
AAGCCGCACG GTGAGGAAGA TCCGGAAGAA TTCGACCTCG CCCAGGAGAA CGACGGCAGT
GTCGAGGATG CGCCGGTGGT GCGCTTTGTC CGACAACTGC TGCTGGATGC CATTCAGCGC
GAGGTGTCCG ATATTCATCT GGAGCCCTAT GAAAAGGATT TTCGGGTACG TTACCGCCTC
GATGGCGTAC TGCAGGACGC GCTGCATCCG CCCGTGGCGT TGCGGGACGG GGTCACCTCG
CGCCTGAAGA TTCTTTGCCG TCTGGACATT TCCGAGCGAC GTCTGCCTCA GGACGGCCGA
CTGCGCGTCC GCGTGCCCCC GGCCCGGGTC ATCGATTTTC GCGTCTCCTT TCTGCCCACC
AGTTTCGGCG AAACGGTCGT GCTGCGCCTG CTGGATCCCG CCAGTTCCAG GGTGCCCATC
GAGCAACTGG GCTTTTTACC AGAGCAGCGC AAAGCCTTTG AGGACGCCAT CCATCGGCCC
TACGGCATGA TTCTGGTCAC CGGGCCCACG GGTTCCGGCA AGACCACGAC CCTCTATACC
GCCCTGAACA TCCTCAACAC TGGTGACTGC AACATCAGTA CCGCAGAGGA CCCCGTGGAA
ATCCCGGTGT ACGGGATCAA TCAGGTGAAC ATCAACGAGC GCATCGGCCT CACCTTCGCC
GCAGCCCTGC GCTCCTTCCT GCGCCAGGAC CCGGATATCA TCATGGTCGG CGAGGTACGC
GATCTGGAAA CCGCCGAAAC CGCCATCAAG GCCGCCCAGA CGGGCCATCT GGTATTGGCC
ACCCTGCACA CCAATGATGC TCCACAGAGT CTCACCCGCC TCGAGAACAT GGGTATTCCC
ACCTATAACA TCGCCGGCAG CGTACATCTG GTGATGGCGC AGCGACTCGT CCGCAAGCTC
TGTCCGCACT GTAAGAAATC CCTGCGCATA CCCGAACGGG CCCTGATCGA GGCGGGCTTT
GCGCCCGAGG ATCTGCAGGG TTGGCGCCCT CTGGGTGCCG TGGGCTGCGA ACAGTGCAAT
AAAACCGGAT ATAAGGGCCG GATGGGGCTT TATCAGGTGA TGCCGGTGAG CGACGCCATG
CGCGAAATCA TCATGCATGG CGGCACTTCC ATCGACTTGG CGCGGCAGGC GGCACAGGAG
GGGGTGCTGA CCATGCGGCA GAATGGGCTG AAGCGGATCC GGGAGGGCGT GACCAGTCTG
GAGGAGGTGC TGCGGGTGAC CAATCTTTGA
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| Protein sequence | MATNPEHISL TPVLRALVSN GLSDEARLQS LAADPARGKT PLLFYVVEKG AVPAAVLMAH
LSARYNMPML DLDAAVIDAL LIRKLDKGLM TRYLVLPLSK HGDTLYLAMA DPTDFKAVED
VKFNSGLQVM PVLVEANKLV KAVHAAVNSL QGGIDDVFVD KPHGEEDPEE FDLAQENDGS
VEDAPVVRFV RQLLLDAIQR EVSDIHLEPY EKDFRVRYRL DGVLQDALHP PVALRDGVTS
RLKILCRLDI SERRLPQDGR LRVRVPPARV IDFRVSFLPT SFGETVVLRL LDPASSRVPI
EQLGFLPEQR KAFEDAIHRP YGMILVTGPT GSGKTTTLYT ALNILNTGDC NISTAEDPVE
IPVYGINQVN INERIGLTFA AALRSFLRQD PDIIMVGEVR DLETAETAIK AAQTGHLVLA
TLHTNDAPQS LTRLENMGIP TYNIAGSVHL VMAQRLVRKL CPHCKKSLRI PERALIEAGF
APEDLQGWRP LGAVGCEQCN KTGYKGRMGL YQVMPVSDAM REIIMHGGTS IDLARQAAQE
GVLTMRQNGL KRIREGVTSL EEVLRVTNL
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