Gene AFE_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0153 
Symbol 
ID7137113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp136020 
End bp136712 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID643528567 
Productintegral membrane protein 
Protein accessionYP_002424662 
Protein GI218667739 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.679008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCACG ACGAACACCA TCACCATGAG AAGATCGGCT GGCTCCGGGC CGGTGTGCTG 
GGCGCCAACG ATGGTCTGCT CTCGACAGCA AGCCTCCTTG CCGGTATCGC TGCCGGACAG 
GCAAGCCATG AACAAATTCT GCTCGCCGGT GTTGCGGCGC TGGTCGCCGG CGCTTTTGCC 
ATGGCGGCTG GCGAGTATGT ATCCGTGAGC TCACAGGCCG ATACCCAGGC CGCAGATCTC 
GAAACGGAAA GACGCGAACT GGAAAAAAAC CCTGGAAAAG AACTGCTCGA ACTCAGGGGC 
ATCTATGTGG CGCGTGGCCT TAGCGAGGCG CTGGCCCAGC AGGTCGCCAC CCAGCTTATG 
GAGCATGATG CCCTTGCTGC ACATGCCCAT GATGAACTGG GCATGACGAA AATGGCGGCG 
GCGCGGCCCG CCGAAGCGGC ACTGGCTTCC GCCACTGCCT TTGCATGTGG AGCCCTGTTC 
CCGGTGCTGA TCGCCGCCTT CGTCCCCCAC GGCAGGGTAC TACCGGCCCT GTATACGGCC 
AGCATCCTCC TGCTGGTGTT CCTTGGTGCG GTCGCAGCCC GGGCGGGTGG CGCCCCCATG 
GTGAAGGGCG CCACCCGCGT GGTCTTCTGG GGTGTTCTCT CGATGGTCGC CACCACGCTG 
ATCGGCCATC TGCTCGGCCA GACGGGTATC TGA
 
Protein sequence
MYHDEHHHHE KIGWLRAGVL GANDGLLSTA SLLAGIAAGQ ASHEQILLAG VAALVAGAFA 
MAAGEYVSVS SQADTQAADL ETERRELEKN PGKELLELRG IYVARGLSEA LAQQVATQLM 
EHDALAAHAH DELGMTKMAA ARPAEAALAS ATAFACGALF PVLIAAFVPH GRVLPALYTA 
SILLLVFLGA VAARAGGAPM VKGATRVVFW GVLSMVATTL IGHLLGQTGI