Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0150 |
Symbol | |
ID | 7134658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 134110 |
End bp | 134904 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643528564 |
Product | hypothetical protein |
Protein accession | YP_002424659 |
Protein GI | 218666197 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.825231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAT CTGCCGGTTC TTTGACCAAC TCTCCGGATC TACCCAGTCA ACCTGTGCTG GCGCAACCAT TCGCGCAAGA AGATTTTCGG TCTATAACAT TACGCTTCGA TCTTTCGGCG ACTCAAAGTA CCATGCATAA ATCTGCGCCA GATAAGCTGG TCCTGGGTTA TACCCGCACC ATGATGGGTT TTCTGATTCT ACAGCCAAAA CCCAAACGGA TTGCCATGAT CGGCCTGGGT GGAGGTTCAC TGGCAAAATA TTGTCTGCGC CACATTCCGG ATGCCCACTT CACTGCCGTG GAGATTAATT CCAAGGTCAT TGAGTTGCGC GACCGCTTCG GCATCCCACC AGATGGTGCC AATTTCCAGG TGTTGAGTGG GGATGGCGCA GTATATGTCA GCAACCACAC CAAGCCGGTC GATGTGCTAC TGGTCGATGG TTTCAACCAT GATGGCCAAC CCAGGCAACT ATGCAGCGCA AGGTTCTACA ACGACTGTTA TGCCAAGCTG CGAAAGAATG GGGTACTGGT GATCAACATG CTCAGCAGTG ACTGGCAATG CGATGCCTAT GTCGCCCGCA TCCAGACAAG CTTCGACAAT CAGGTCATTG TTATAGACGC AGAAGAGTCT GGCAACAAAA TCGTATTTGC ATACAAAGGT ACGGACTTCC CCCGATTGGC GAGCGAAATA AGTGATCGCG TTCGCGCACT GAAGCCCTCA CACAGTATCT CTTTGCACGC CACCGCGCAG AAATTATCCC AACAATTCAA GCAACTTTAT TCAGGCCGCG CGTAA
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Protein sequence | MNESAGSLTN SPDLPSQPVL AQPFAQEDFR SITLRFDLSA TQSTMHKSAP DKLVLGYTRT MMGFLILQPK PKRIAMIGLG GGSLAKYCLR HIPDAHFTAV EINSKVIELR DRFGIPPDGA NFQVLSGDGA VYVSNHTKPV DVLLVDGFNH DGQPRQLCSA RFYNDCYAKL RKNGVLVINM LSSDWQCDAY VARIQTSFDN QVIVIDAEES GNKIVFAYKG TDFPRLASEI SDRVRALKPS HSISLHATAQ KLSQQFKQLY SGRA
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