Gene AFE_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0150 
Symbol 
ID7134658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp134110 
End bp134904 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content51% 
IMG OID643528564 
Producthypothetical protein 
Protein accessionYP_002424659 
Protein GI218666197 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.825231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAT CTGCCGGTTC TTTGACCAAC TCTCCGGATC TACCCAGTCA ACCTGTGCTG 
GCGCAACCAT TCGCGCAAGA AGATTTTCGG TCTATAACAT TACGCTTCGA TCTTTCGGCG
ACTCAAAGTA CCATGCATAA ATCTGCGCCA GATAAGCTGG TCCTGGGTTA TACCCGCACC
ATGATGGGTT TTCTGATTCT ACAGCCAAAA CCCAAACGGA TTGCCATGAT CGGCCTGGGT
GGAGGTTCAC TGGCAAAATA TTGTCTGCGC CACATTCCGG ATGCCCACTT CACTGCCGTG
GAGATTAATT CCAAGGTCAT TGAGTTGCGC GACCGCTTCG GCATCCCACC AGATGGTGCC
AATTTCCAGG TGTTGAGTGG GGATGGCGCA GTATATGTCA GCAACCACAC CAAGCCGGTC
GATGTGCTAC TGGTCGATGG TTTCAACCAT GATGGCCAAC CCAGGCAACT ATGCAGCGCA
AGGTTCTACA ACGACTGTTA TGCCAAGCTG CGAAAGAATG GGGTACTGGT GATCAACATG
CTCAGCAGTG ACTGGCAATG CGATGCCTAT GTCGCCCGCA TCCAGACAAG CTTCGACAAT
CAGGTCATTG TTATAGACGC AGAAGAGTCT GGCAACAAAA TCGTATTTGC ATACAAAGGT
ACGGACTTCC CCCGATTGGC GAGCGAAATA AGTGATCGCG TTCGCGCACT GAAGCCCTCA
CACAGTATCT CTTTGCACGC CACCGCGCAG AAATTATCCC AACAATTCAA GCAACTTTAT
TCAGGCCGCG CGTAA
 
Protein sequence
MNESAGSLTN SPDLPSQPVL AQPFAQEDFR SITLRFDLSA TQSTMHKSAP DKLVLGYTRT 
MMGFLILQPK PKRIAMIGLG GGSLAKYCLR HIPDAHFTAV EINSKVIELR DRFGIPPDGA
NFQVLSGDGA VYVSNHTKPV DVLLVDGFNH DGQPRQLCSA RFYNDCYAKL RKNGVLVINM
LSSDWQCDAY VARIQTSFDN QVIVIDAEES GNKIVFAYKG TDFPRLASEI SDRVRALKPS
HSISLHATAQ KLSQQFKQLY SGRA