| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0134 |
|---|
| Symbol | hemN |
|---|
| ID | 7136734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 121003 |
|---|
| End bp | 122394 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643528548 |
|---|
| Product | oxygen-independent coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_002424644 |
|---|
| Protein GI | 218665989 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAA CGCCCACCCA AAGCCTGATT TTCGACCCGG AACTCATCCG CCGTTACGAC
CAGCCGGGGC CGCGCTACAC CTCGTACCCC ACAGCCCCCC ATTTCCGCGA AGATTTCGAT
GAAAGATCGC TGCAAGGCGC GCTCGACCGC TCCAATACCA GCGGTCGCCC ACTCTCTCTA
TACTTCCATA TCCCCTTTTG CGAGCATCTG TGTTTTTACT GCGCCTGCAC CAAGGTGGTC
ACCCGCCACC ACGAATGGGG AACACCCTAT GTCGCCCATC TGGACCAGGA AATGGCCCTG
ACGCGCGCCC ACATCGACGG CAACCGTCCC GTGGACCAAC TGCATTTCGG CGGCGGCACT
CCCACTTTCC TCCGCCGGCA TGACATGACC GTCCTCCTGG ACAGCATCCG CAAACACTTC
CTTTTGCTCC CGGATGATCG AGGTGAATAC GGCATCGAAA TCGACCCGCG CGCGCTGGAG
CCCGGCACGC TCCGCCTCCT CCGCGACTTC GGCTTCAACC GCATCAGCAT CGGGGTGCAG
GATCTGGATA CGGCGGTGCA GAAAGCCGTG CATCGCGAAC AGAGTTTTGC ACTCACTGCG
GGTGTCATCG GCGAGGCGCG CCAGCTTGGC TTTCGCTCCG TCAGCCTCGA TCTGATCTAC
GGCCTGCCCC TGCAGACCCC GGAAAGCTTT GCCCGGACGC TGGAAGCGGT TCTCGCCATG
CGTCCGGATC GCCTGTCCGT CTTCAATTAT GCCCACCTGC CGGAGCGGTT CCCGCCCCAG
AAGCGGATTC CCGACGCGGA CATCCCCAGT CCCGACACCA AGCTACGCAT CCTCGCCGAA
AGCATCGCCA CCCTGCAGGA GGCCGGTTAT CTCTATATCG GCATGGACCA CTTCGCCCTG
CCCGATGACG AATTGGCTAT CGCACAGCGG GAAGGTAGTC TGTATCGCAA TTTTCAGGGC
TACTCCACCC ATGCCGGGAC GGATCTGTTG GCCTTCGGGA TGAGCGCCAT CGCCATGGTC
GGTCCCACCT ACAGTCAGAA CATCAAGGAT CTGGATACCT GGGGCACCAC CCTGGAGAGC
GGCCACCTAC CGGTGGAGCG CGGCCTGCAC CTGGGCGACG AGGACCTGCT GCGCCGCCAC
ATCATCACCC GTCTGATCTG CGATTTCAGC CTGGATTTCG CCGCGCTGAA CCGGCAGTTC
GGCCTGGATT TCCACCAGCA TTTCGCAGCC AGCCTGCCCG CCCTGGAGGC CATGGCGAGT
GATGGACTCC TGCACATGGA CGCTCACACC CTGACGGTCA CTCCGCAGGG GCGGCTGCTG
ATCCGCCATA TCTGCATGGC CTTCGACGCC TACCTCGCGC AAAAGCCGGT GCGTTACTCG
CGGGTGATTT GA
|
|---|
| Protein sequence | MTITPTQSLI FDPELIRRYD QPGPRYTSYP TAPHFREDFD ERSLQGALDR SNTSGRPLSL
YFHIPFCEHL CFYCACTKVV TRHHEWGTPY VAHLDQEMAL TRAHIDGNRP VDQLHFGGGT
PTFLRRHDMT VLLDSIRKHF LLLPDDRGEY GIEIDPRALE PGTLRLLRDF GFNRISIGVQ
DLDTAVQKAV HREQSFALTA GVIGEARQLG FRSVSLDLIY GLPLQTPESF ARTLEAVLAM
RPDRLSVFNY AHLPERFPPQ KRIPDADIPS PDTKLRILAE SIATLQEAGY LYIGMDHFAL
PDDELAIAQR EGSLYRNFQG YSTHAGTDLL AFGMSAIAMV GPTYSQNIKD LDTWGTTLES
GHLPVERGLH LGDEDLLRRH IITRLICDFS LDFAALNRQF GLDFHQHFAA SLPALEAMAS
DGLLHMDAHT LTVTPQGRLL IRHICMAFDA YLAQKPVRYS RVI
|
|---|
| |