| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0130 |
|---|
| Symbol | |
|---|
| ID | 7135242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 118133 |
|---|
| End bp | 119488 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643528544 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002424640 |
|---|
| Protein GI | 218665478 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1565] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTGGC GTTTCCGGGG CAGCCAGGTC GCCCGCGATC AACAAGGGTT CAGTTCCATG
CCGCGCGCGC AACTCCTGCG CCAGGGCTTC GGCGTCTGCG GCGGATCGCT TATAATGCAG
GGCGAGCTGG CAGCCTTCCG CGGCGAGCTG GCGGGCAATG GCGGCGCCTA CCCTGCGGGC
GGCGCCCGTG ATGAGAACGA CTTTTCCGGT AGCTTTCAAG AGGTGTCCAT GCGCGTAGAG
CGTCCCGATT TTTTAACCCA TTCTCACGGG GCGCGCAAGA CAAGTCTGCC CGCCCCGGAC
GCCGATGCGC TGGCCCACTC GTCCGCACTG CTGACCCATA TCCGGCGGGA AATCGATGCC
GCAGGCGGGA TGATCCCCTT TCGTCGTTAT ATGGAGCTCG CCCTCTACAC GCCGGGGCTG
GGCTATTACA TGGCGGGGCA GACCCGCTTC GGTGCGGCGG GCGACTTCGT CACGGCACCG
GAAATGGGAC GGGTGCTGGC CGCTGTGCTG GCCCGGACCC TGCAACCCGA TCTGGGGCCG
GATGGCATTC TGGAATTTGG CGGTGGGAGC GGCGCGCTGG CGGGCCAGAT CCGGGACATT
TTGCCGGACA CCCCCTACAC CCTGCTCGAA CCCAGCCCCG ATTTGCAGGC GCGGCAACGA
TCAGTCGTGA CTGGTATTCA GCATCTGCAA ACTCTGCCGG AGCACTGGCG CGGCGTGATG
CTCGCCCACG AAGTGCTGGA TGCCATGCCG GTGCAGGTGC TGGAGCTGGA TGCCTCCGGG
CAGTTGCACG AATGCGGCGT GCGCTGGAAT GGCGAGGCAC TGGATTGGGT GATGCTGCCT
CCGCCGGTCG CTGCGCCTCT GGCGGCGCGG CTGGCGCCCT ATGTAACGCA TTGGCCCCGG
CCCTATCGGA CGGAAATCAA TCTCACTGCC GAATCCTGGC TGCGCGAGGT CGCCGCCCGC
CTGGACTCCG GCGCCATCCT TCTGATCGAT TACGGGTACG AGGCCGCAGA GTTTTATCAT
CCCCAGCGGC AGATGGGCAG CCTGCGCGCC TATTATCGCC ACCACTGGCT GGATGATCCC
TTTTATCTGC CAGGCCTCTG CGACCTCACC GCCCATGTGG ATTATACCGC GCTGATGACC
GCTGCGGTGG AGGCCGGGCT GGAGGTGGCC TTTTATGGCC ATCTCGCCCG TTTTCTGGTG
GAACATGGGC TGGCCGAGGT GTATGGCACC CTTTGTGCGC AGGCGGGTGA GGACGGCCGC
TTCGCCCTGA ATAATGAGAT CAAACGGCTC ACCCTGCCGC AGGAAATGGG CGAAAGCTTC
AAGGTATTGA TTCTGAAAAA GCGGGAGAAC ACTTGA
|
|---|
| Protein sequence | MRWRFRGSQV ARDQQGFSSM PRAQLLRQGF GVCGGSLIMQ GELAAFRGEL AGNGGAYPAG
GARDENDFSG SFQEVSMRVE RPDFLTHSHG ARKTSLPAPD ADALAHSSAL LTHIRREIDA
AGGMIPFRRY MELALYTPGL GYYMAGQTRF GAAGDFVTAP EMGRVLAAVL ARTLQPDLGP
DGILEFGGGS GALAGQIRDI LPDTPYTLLE PSPDLQARQR SVVTGIQHLQ TLPEHWRGVM
LAHEVLDAMP VQVLELDASG QLHECGVRWN GEALDWVMLP PPVAAPLAAR LAPYVTHWPR
PYRTEINLTA ESWLREVAAR LDSGAILLID YGYEAAEFYH PQRQMGSLRA YYRHHWLDDP
FYLPGLCDLT AHVDYTALMT AAVEAGLEVA FYGHLARFLV EHGLAEVYGT LCAQAGEDGR
FALNNEIKRL TLPQEMGESF KVLILKKREN T
|
|---|
| |