Gene AFE_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0109 
Symbol 
ID7136280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp101733 
End bp102815 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content61% 
IMG OID643528524 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002424620 
Protein GI218667857 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGG CCTTTTTCTT ACTGGGTATC GTTGTCGTGC TGCTTTTTGG CGGTGTTTAT 
GGCTGGTATC AATGGCGTCA GGGTCGGTTG CACACACGCC TGGCGGCGGC GGCCAACCCG
GTGGTCACCG TTTCTGCCAC GCGCGCGCAA AACGAGTCGA TGGCGGGTGA GTTGACCGCC
GTGGGCGAGA TCGTGCCGCA ACAGGGAGCG GTGCTCAGTC CTCAGACCGG GGGGGTGGTG
CAGCATATCG GCTTTCACTC CGGTGCCACA GTGCAAAAGG GACAACTGCT CCTGTCTCTC
GACCCCGGCG CTTTGCCTGG CCAGTTGCAG GCCGCCAAGG CCGAGGCCGA CCTCGCGCAG
GTGGATTATC AGCGCGCCGA GAAGGTCTTT GCCATCCACG GCATCTCTAC CGCTGCACTG
GATAAGGCTC GCTATGGTGC CAGCGTGGCC CAGGCCCGGG TGACGGCCTT GCAGGAGTCT
CTGGCGGATA CGCAGATCCG TGCCCCTTTC AGCGGAGTAT TGGGGTTGCG TACCGTGAAC
CTGGGGGAAT ATGTCCATGC GGGTATGCCG GTGGTGCATA TCGAAAACCT GCAGACGCTC
TACGCCGATT TCACGGTACC TCAGCGTGAT GTGCAGGCGG TGCGGGCGGG CGGGCCGATA
CAACTTGACG TGCATGACGG GATTATCCTG CGCCATTACA GTGCCAAAGT GCAGGCAGTT
TCCAGTCATG TGGATGCGCA AAACCGGGCA GTCAGCGTTC GCGCCCTCGT CGATGCGCCA
CTGGGCTTGA AACCGGGCAT GTTCGTCCGC GTCGTCCTGC AAAAGGAGGC ACCCACGGCA
CGCCTGATGA TTCCTACGGT GGCAGTAAGC TTCAATACCT ATGGGGACTT TGTCTATGTG
CTGACCCCGG GACCGGACCG TACCCTGATC GCCAAAGAGC AGCCGGTGAC CACGGGCCTG
CAGCGCGGTA ACCAGGTGGT GGTCCGTTCC GGCCTCAAGG CGGGCGACCT GGTAGTCACC
GCGGGGCAGG TCAAACTGCA CAGTGGTGAC CATGTGCGCA TCAATAACGC TGTGCATCTC
TGA
 
Protein sequence
MKKAFFLLGI VVVLLFGGVY GWYQWRQGRL HTRLAAAANP VVTVSATRAQ NESMAGELTA 
VGEIVPQQGA VLSPQTGGVV QHIGFHSGAT VQKGQLLLSL DPGALPGQLQ AAKAEADLAQ
VDYQRAEKVF AIHGISTAAL DKARYGASVA QARVTALQES LADTQIRAPF SGVLGLRTVN
LGEYVHAGMP VVHIENLQTL YADFTVPQRD VQAVRAGGPI QLDVHDGIIL RHYSAKVQAV
SSHVDAQNRA VSVRALVDAP LGLKPGMFVR VVLQKEAPTA RLMIPTVAVS FNTYGDFVYV
LTPGPDRTLI AKEQPVTTGL QRGNQVVVRS GLKAGDLVVT AGQVKLHSGD HVRINNAVHL