| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0079 |
|---|
| Symbol | |
|---|
| ID | 7136198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 78949 |
|---|
| End bp | 80160 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643528496 |
|---|
| Product | glycosyltransferase, putative |
|---|
| Protein accession | YP_002424593 |
|---|
| Protein GI | 218666725 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.471525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TGCACCTGAA TACCTTCGAC GACCCGGTCG ATGGTGGAGG CGCTGAAGTT
GTTCTTTGGG AACTGATACG GGGACTCGCT AGTGCAGGCC ACGATAATGT TCTTCTTGCG
ACCCGCGACC AACCTGGGCT GCAAAGGATC GAGCGCGATG GCATTCCCAT CTGGCGTGCG
GGGCTCCGCA ATTGGTACTG GTCAGGGAAC CATACACCCA AAGGAGCCGC TCTGCGGGCC
ATGTGGCATG CATTCGATAG CTACAATCTC TGGATGCAGG ATTACCTGCT TCGGGTATTG
CGGACAGAGC GGCCTGATGT GGTGACGGTA CATGGCCTAT CCGGATGGTC AGCCGCATCA
TGGAAAACGA TCCAAAGCCA AGGCATCCCC ATCGTGCAAG TCCTGCATGA CCATTATCTA
TTATGCCCAA GGGCAACCAT GTTCAAAAAG GGGCGTACTT GTGAAAAACA ATGTACTAGT
TGCCACTTGC TGCGCATTTG GCATCCCAAC TTAAGCAATG CGCTCTCTGC GGTAGTAGGG
GTAAGTCGCT ATATTCTTGA TCGCCATATG GCATTGGGCT ACTTTCAGGA CGTGGCTCTG
CGTGAGGTGA TTCACAATGT CCGCAGCCCC AGCGCCTTGG GCCTCGATGA GCCTACGCCA
GTGCGTGAAT CGCCTACGGG CTTGCGTATA GGCTTTATCG GCCAGCTAGT CCCTGCCAAG
GGGGTAGAGG TCCTAATGGG AGCGTTCAAA ACTGCCGTGT TACCGAATGC GGAACTCTGG
ATTGCGGGCA GAGGTAAACC AGATTATGAG GCGTCATTGC GTAAAAACGC TGCATCAACT
CCTGTGCGCT TTCTCGGTCG CATGGCACCA CGAGACTTTT ATCCTCAGGT GGATATTGTT
GTGGTACCTT CCTTGTGGCA GGAGCCCCTT GGCTTGGTCG TGGCGGAGGC TCTCGCATTT
GGTAAGCCCG TCATCGCTTC AAAGCGTGGA GGCATTCCGG AGATGATCAA AGATGGTGAG
AATGGTTTGT TATTCGAGCC GAATCGTCCG GAAGATCTAC AGGAATCTTT ACATCGTCTT
GGCAGTGATC GGGCAATGCG CGTCCGTATG GGGAAAACGG CCAAAATATC GTCCGCCAAT
TTTCTCGACG TAACCCGATG GATCGACGGA TATATAGATA TTTATAGGCA ACTTGATAAG
CACGGAATAT AA
|
|---|
| Protein sequence | MKILHLNTFD DPVDGGGAEV VLWELIRGLA SAGHDNVLLA TRDQPGLQRI ERDGIPIWRA
GLRNWYWSGN HTPKGAALRA MWHAFDSYNL WMQDYLLRVL RTERPDVVTV HGLSGWSAAS
WKTIQSQGIP IVQVLHDHYL LCPRATMFKK GRTCEKQCTS CHLLRIWHPN LSNALSAVVG
VSRYILDRHM ALGYFQDVAL REVIHNVRSP SALGLDEPTP VRESPTGLRI GFIGQLVPAK
GVEVLMGAFK TAVLPNAELW IAGRGKPDYE ASLRKNAAST PVRFLGRMAP RDFYPQVDIV
VVPSLWQEPL GLVVAEALAF GKPVIASKRG GIPEMIKDGE NGLLFEPNRP EDLQESLHRL
GSDRAMRVRM GKTAKISSAN FLDVTRWIDG YIDIYRQLDK HGI
|
|---|
| |