| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0067 |
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| Symbol | tolB |
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| ID | 7135036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 67572 |
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| End bp | 68840 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643528484 |
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| Product | tol-pal system beta propeller repeat protein TolB |
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| Protein accession | YP_002424581 |
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| Protein GI | 218665098 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.518188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAC GCTTTTGGAC CCTGGCCATT TTTCTGCTGG CATGGGCCTT CGTTCTTCCC
GCCCAGGCGG CGCTCACGGT GGAGATCACC AAGAATGTGG CCTCGGCACT GCCTATCGCC
ATTCCTTCCT TTGGTCCCGG CATAGCCGGG CAGCCATCCG TTGCCGAGGT GGTCCGTAAT
GACCTGCGCC ACAGTGGGTT GTTCCGGGTC ATCGACCCTG CGGGCTACCC CGCCGACCCC
CGCGCCCCCG GCGGCGTGAA GGCCGCGGAC TGGACAGCGG TAGGGGCCAC CGGCCTGGCC
GTGGGTTCCG TGGAACCGCG GAACGGCGGC TACGCGGTCA ACGTCTACGT CTACAATGTC
AGCACGGGGC AAGAACTCAC CGCCCACCGT TTCACCTGTT CGGCCGCCGA GTTGCATATG
ACCGCGCATC ACGTCGCGGA TGTCATCTAC CAGGCGTTCA CCGGCAAACC CGGCCCCTTC
GCCAGTCGGA TCGCCTATGT CCGGCAGACG GGTGCAAACT ACGAACTGCT GGTGGCAGAA
TCCGACGGCT GGAATCCGCA CCCCATCGTG CGCGGCCGCA TGCCGGTATT CTCCCCCGTC
TGGTCGCCGG ATAACCGGCG TCTGGCCTAT GTCACCTACG CCAACGCCCG CGCCGTGATC
TATGTCCAGG ATCTGGCTAC CGGACAGCGT CAGTCCATCG CCCCCGGTGG CGAGATCGTC
AGTGCTCCGG CCTTCTCGCC CAACGGGACG GAACTGGCCT ATGCCCGCTC CTCCGGTGGC
CACACCGAGC TTTACGTGGC GAACCTGCAG ACCGGGCAGC GCCGGCAATT GACCCATGAT
GACGCCATCA ACACCTCTCC CACCTGGTCG CCGGACGGCA GTCGGATCAT TTTCGTCTCT
GATCGTGCCG GTGGCCCGCA AATCTACGCG ATGAACGCGA GCGGCGGTGC GGCGCATCGT
CTGAGCTACG ACGGCAGCTA CAATGCCAGC CCGGTCTATT CGCCCGCGGG CAACGCGATT
GCTTTCATTC ATCGCACCAA CGGCGTCTAT GCCCTCGCGG TGATGAACCC GGACGGCAGC
GGCGTGCGCG TGCTGGATGC CCAGGGCAAT TGCGATCATC CGAGCTTCGC CGGCAACGGC
CAGATGATCC TCTACGGCAC TCAGCGCGGC GGGCGCAAGG TGCTGGCCGA GGTCAGCCTG
GACGGCAAGA CCATGGCCAT TCTGCACAGC AACGCGGGAG AAGACAGCCA ACCGGCCTGG
TCCCATTAA
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| Protein sequence | MAKRFWTLAI FLLAWAFVLP AQAALTVEIT KNVASALPIA IPSFGPGIAG QPSVAEVVRN
DLRHSGLFRV IDPAGYPADP RAPGGVKAAD WTAVGATGLA VGSVEPRNGG YAVNVYVYNV
STGQELTAHR FTCSAAELHM TAHHVADVIY QAFTGKPGPF ASRIAYVRQT GANYELLVAE
SDGWNPHPIV RGRMPVFSPV WSPDNRRLAY VTYANARAVI YVQDLATGQR QSIAPGGEIV
SAPAFSPNGT ELAYARSSGG HTELYVANLQ TGQRRQLTHD DAINTSPTWS PDGSRIIFVS
DRAGGPQIYA MNASGGAAHR LSYDGSYNAS PVYSPAGNAI AFIHRTNGVY ALAVMNPDGS
GVRVLDAQGN CDHPSFAGNG QMILYGTQRG GRKVLAEVSL DGKTMAILHS NAGEDSQPAW
SH
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