| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0040 |
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| Symbol | |
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| ID | 7135072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 43609 |
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| End bp | 45231 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643528457 |
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| Product | drug resistance transporter, EmrB/QacA family |
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| Protein accession | YP_002424554 |
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| Protein GI | 218665640 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.295395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCGTTC GCCCTGTTTC TCCAGACGCC GTCGCTGACC CCACATTTAC CAGGGTAGAT
AGCGTGCTGC TGTTGCTGGG CCTGAGCAGC GGCCTGCTGC TGGCTTCGTG GAGCCTCGCC
TGGTCCATCC CGATGCTGCC GTACATCGCT GGCGCCTACA GCACCAGCCT CGACCACGCG
ATCTGGTCGC TGACTTTTTA CCTGCTGGCC TGGGCGCTCG CGGTGGTACC CGCGACCTGG
CTCTACCAGC GTTTCGGTGA ACTGCGGATG TTTCAGATCT CCCTCACCCT GCTGATGGTG
GCCACCCTGC CCGATGTCTT CAGCGACCAT TTCGGCTTAT TTTTGGGCGG CAGGTTTGTG
CAGGGCATGG CGGCGGGTTT TCTGACGCCC CTGACCCGGC GACTGCTGAT CCGCTATGCG
CCGTTGCGCT GGCAAAAGAC GGCTGCCGAT CTCAGCATCG TCAATCTGGT GCTGCCCTTG
CTTGCCGGGC CCTCGCTGGC GGGCTGGATC GCCTATACCT GGGACTGGCG GGCCGCGGCG
GTGTTGACCT TTCCCGTGGG TTTACTGGCG CTGGGCATGG TCTCCGCCCT GTTGCGCGAC
AATCCCGAGG AACACCTGCG CCAACCCTTC GACTGGATCG GGCTGGTGCT GCTCGCCGCA
TGGAGCGCCA CCTTCCAGAT CGTGCTCAAC CGCGGCGAGG ACTGGAACTG GTGGGATGCC
CCCGCCATCC GCTGGCTGAC CGCGCTGGGC GCCGTGCTCC TCGTGGCCTT CTTCCTCTGG
GAAAGGGATC AACCGCACCC CTGCCTGGAC CTCCGCCTCC TGCGGCGACG GAATTACGTG
CTGGCGCTGC CGGCGCTGGT TTTCGGGTGG GGACTGCTGC TGGGCGGGAA CAGTCTTTTT
GTCTCGGCCC TCATCAGTCA TGCCAACTAT TCCGCTTTCT GGGCGGGCGT GGTGTTGCTG
CCCATGGCCC TCGGCGGCGT GCCACTGATC GCGGTGATGG GACCCATCTC GCACCGGGTG
AATCCGCGCT GGCTGGCAAC CATCTGCTTT GGATTCGTCG CCATTTATGG ATTCACCACT
CGGCTCAACC TGCACAGCAA TCTGCGCAGC CTGCTTCTCA GCCATTTGAT CGAAGGCGTC
GCCATCGGGT TTTATCTGGT ACCCCTGAGC TTGATCATGT TTTCACGGCT GCCCCAGAGC
CGCCTGCCCG CGGCGGCCAC CTTGCAGAAC TTCGTGCGGA TTCTCGGCGG CGCTTATCTG
TCCAGCGCTT TCTCGGCGCT GTGGATGCGT CATGGCGACA CCTTCAGGGC GCATCTGACC
TGGCAATCCC CCACTTTGCC CCTGCAAAGC ATGCTGGAGC ACTGGCCCGT AAGGGGCTCC
GCAGCGCGGG CCCTGTCCAT CCAGCACCTG ACCACCCAGA GTGCCGCACT ATCCATGCAA
TCCATGCTCT GGCTCTGGGG CTGGATGGCG CTGGTTGTGC TTGCCCTCGT ATGGCTCACC
AAAGGGCCAT ATCGCCGCAG GGCAGGGCAG GTTCGGCGGG TCACCATCGA GCAGCAGATC
ATGGAAAGCG CCGGTTTTGA CGCGGAGCCG AGTCGGCGGG AGGATGTGGA ACGTGCACCG
TAA
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| Protein sequence | MAVRPVSPDA VADPTFTRVD SVLLLLGLSS GLLLASWSLA WSIPMLPYIA GAYSTSLDHA
IWSLTFYLLA WALAVVPATW LYQRFGELRM FQISLTLLMV ATLPDVFSDH FGLFLGGRFV
QGMAAGFLTP LTRRLLIRYA PLRWQKTAAD LSIVNLVLPL LAGPSLAGWI AYTWDWRAAA
VLTFPVGLLA LGMVSALLRD NPEEHLRQPF DWIGLVLLAA WSATFQIVLN RGEDWNWWDA
PAIRWLTALG AVLLVAFFLW ERDQPHPCLD LRLLRRRNYV LALPALVFGW GLLLGGNSLF
VSALISHANY SAFWAGVVLL PMALGGVPLI AVMGPISHRV NPRWLATICF GFVAIYGFTT
RLNLHSNLRS LLLSHLIEGV AIGFYLVPLS LIMFSRLPQS RLPAAATLQN FVRILGGAYL
SSAFSALWMR HGDTFRAHLT WQSPTLPLQS MLEHWPVRGS AARALSIQHL TTQSAALSMQ
SMLWLWGWMA LVVLALVWLT KGPYRRRAGQ VRRVTIEQQI MESAGFDAEP SRREDVERAP
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