| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0039 |
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| Symbol | |
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| ID | 7134139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 42174 |
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| End bp | 43628 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643528456 |
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| Product | RND efflux system, drug efflux transporter, outer membrane lipoprotein |
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| Protein accession | YP_002424553 |
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| Protein GI | 218665460 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAACG TGCACCGTAA ACGCTGGATC GCCGCATGCG CGGCCCTCGG CGTCGTGGCC
CTCGGCGGCT GCGCGCCGAC CATCCGTGCC CCGAACCCCG CGGATGTCAA GGCGCCGGCC
TGGGCGATGA GCGTGCAACG GATGGACGGC GCCCAGGCAT TGCCCACCGG CGCGTGGCCG
CAACAGGACT GGTGGACGGG ACTGGCCAGC GCCGGACTCG ATCAAGTCAT GACCCGTGCC
CTGAGCCCGG CCAATCCGCG TTTGGCGGAG GCCGTCGATA CGGTCCAGTG GGCGGCATCG
GTCAGCACCT GGCGGGCGGC GGCCCTCGGT CCGCAGCTTT CCGGGCAGGC GGCCATCACG
CCTTTGCAGT TCAGCGGCAA CAGCCCGCTG GGGGCGCTCG GTCTGGGCAA CAAACTCTAT
GACAGCGGCG ATATCGGCCT CGGTTTTACG CAGGCGCTCG ATTTCTGGGG CAAATATGCG
GACCGCCTCA AGGCGGCGCT GGGTGAACAA CGCGCCGCCG AAGCGCGGCT GGCGGACACC
CGCCGCCTGC TCGCCGCCGC CGTCGTCAAT GCCTATCTGC GCTGGGCGGA AGCCGAACAG
CAGCTCGCCA GCACCCGGCG TTTACAGCAC CTCTACCAAC AGCGGCAAGC GTTGATACGA
ACCCGGCGGT ATCTCGGCCT CGGAACCGAC TTATCCATTG CCAGTCTGTC TTTGCAGATC
CAGCAGAATA CCGCCCGCCT GGCCCGCTGG CAGCAACGGG CGGCTGCCGC ACGCTTCGCC
GTGGCAGAGC TCGCGGCGAT TGCACCGGAC GCCCTCCCGC CACGGCCGGT GGCGCCCGCG
TCTGCAGTAA TCCCCACCCT GCCCCCACAC CTGAGTCTGG ACCTCCTTGC CCACCGCCCC
GACGTGCAGG CGGCTCGCGC GCTGGCGCGG GCCAGCGTCC AGCAGACCAA AGCCGCCCGC
GCCGCTTTTT ATCCGGATAT TTCCTTCTCG GCCTTGCTGG ACATGAACAG CGCCCACCTC
GCCACGCTTC TGAACCCGGC GAGCTTTGCC TACAGTTTTG GACCCGCCTT GCGGTTACCG
ATTTTCACCA GCGGCGCCCT GACCGGCCGC TTCCGCGGCG CCGAGGCGCA GCAGGCCAAG
GCGGTGGCCG TTTACCAGGA AAGCATCCTG CAATCGGTCC GGCAGGTACT GACGGCACTG
TCGGGATACC AGCACGGCCG GCAGGTTTGG CAAGCCGAGG TGGTCGGTAC CGGCGCCACT
CGGGAGCAGG AAAAGCTGAC CGCCACCGCC CAGGCGTTGG GCCTCAGTGA CCGCGCGGCG
CTGCTGCAGC GGCAGATCGC CCTCATCCAT CAGCAAATGA CCCAGCGCCT TGCCCATTAT
GCGGCACTAC AGGCCTGGGC CCAGTTGGAA ACCGCATTGG GAGGCGGCTA TGATCAGTCC
CGACAGCACC CCTGA
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| Protein sequence | MWNVHRKRWI AACAALGVVA LGGCAPTIRA PNPADVKAPA WAMSVQRMDG AQALPTGAWP
QQDWWTGLAS AGLDQVMTRA LSPANPRLAE AVDTVQWAAS VSTWRAAALG PQLSGQAAIT
PLQFSGNSPL GALGLGNKLY DSGDIGLGFT QALDFWGKYA DRLKAALGEQ RAAEARLADT
RRLLAAAVVN AYLRWAEAEQ QLASTRRLQH LYQQRQALIR TRRYLGLGTD LSIASLSLQI
QQNTARLARW QQRAAAARFA VAELAAIAPD ALPPRPVAPA SAVIPTLPPH LSLDLLAHRP
DVQAARALAR ASVQQTKAAR AAFYPDISFS ALLDMNSAHL ATLLNPASFA YSFGPALRLP
IFTSGALTGR FRGAEAQQAK AVAVYQESIL QSVRQVLTAL SGYQHGRQVW QAEVVGTGAT
REQEKLTATA QALGLSDRAA LLQRQIALIH QQMTQRLAHY AALQAWAQLE TALGGGYDQS
RQHP
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