Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0038 |
Symbol | |
ID | 7134992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 41087 |
End bp | 42199 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643528455 |
Product | drug resistance secretion protein, putative |
Protein accession | YP_002424552 |
Protein GI | 218665929 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGTC CCGACAGCAC CCCTGACAAC GCGAGCAAGG CCGGGGCGGA CCAGAGGCGG CGCAACCTCT GGATACTGGC CGCCGTCGTC CTGCTCGGTC TGCTGGTCTA CGGCCTCTGG TGGCTGCTGA TCGGACAAAG GCGACTGGAG GTAGACGATG CCTATGTCGA GGGCAACCTT TACGCGGTGG ATGCGCGCAC GACCGGAACC GTCGCCGCGA TCCCCGCCTA CGACACCATG CGGGTGGAGG CAGGCTCCCC TCTGGTGATA CTCCGCGGCG AACGTGCCGG TCGCAAGCTG CAACAGGCGG AAGCACAACT GGCGCAGGCC CGGCAAAATG CGCTGGCGCT GGTCCACGAA ATTCAGGCCA GTCGCAGCAA GGAGGCCGCC CTGCGGGCCA GCCTGAACAG TGCGCAGCAG AAAGCCTGGC GCCTACGGGC GTCGGCCAGC GCCGGTGCGA GCGAGGATAT GGACGCCATC ACGGCGGCCG ACGCGGTGCG GCGCCTGCAA GCCGAAATCG GCGCCGAATC GGCGCATAGC GCCGCCCTCA TCGCGCAGCT CGGGGCCGCC GGTCCGGCGG GCAATCCCGC CGTACGTGCG GCGACGCAGG CCCTGGCCCT GGCCCGCCTG AACTGGACAC GACGCATCAT CCGCGCCCCG GTCACCGGTA TCGTCGCGCA GCAGGCGGTG CAGCCCGGAC AGTGGGTGAG CGCGGGCCAG CGCCTGTTCA CGGTGGTGCC ATTGCAGCAG ATATGGGTCA CTGCCAACAT CAAGGAAACC CGTCTGGCGG GAGTGCGCCC CGGCGCGGCG GTGACACTGC ATTCTGATCT TTATGGTAAC GGCGTTACCT ATCACGGCTG GGTGGTGGGA CTGGGAGGGG GCTCCGGCGC CGTCTTCGCG GTGCTGCCGC CGGAGAATGC CAGCGGCAAC TGGATCAAGT TCACCCAGCG GGTACCGGTG CGCATCGCCG TCGATCCGAA GGACTTGACC CGGCACCCGC TGCGTCCCGG TCTGACCATG ACGGCCCGGA TCGCGCTGCA TGGCCCGTGG ATACGGCGGC CGGTACCGGA CTGGTTCCTG CGTTCCGCAG CCGCTTCGCG CCCGGCTCCC TGA
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Protein sequence | MISPDSTPDN ASKAGADQRR RNLWILAAVV LLGLLVYGLW WLLIGQRRLE VDDAYVEGNL YAVDARTTGT VAAIPAYDTM RVEAGSPLVI LRGERAGRKL QQAEAQLAQA RQNALALVHE IQASRSKEAA LRASLNSAQQ KAWRLRASAS AGASEDMDAI TAADAVRRLQ AEIGAESAHS AALIAQLGAA GPAGNPAVRA ATQALALARL NWTRRIIRAP VTGIVAQQAV QPGQWVSAGQ RLFTVVPLQQ IWVTANIKET RLAGVRPGAA VTLHSDLYGN GVTYHGWVVG LGGGSGAVFA VLPPENASGN WIKFTQRVPV RIAVDPKDLT RHPLRPGLTM TARIALHGPW IRRPVPDWFL RSAAASRPAP
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