| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0023 |
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| Symbol | ntrY |
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| ID | 7135482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 24231 |
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| End bp | 26363 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643528440 |
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| Product | nitrogen regulation protein NtrY, putative |
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| Protein accession | YP_002424537 |
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| Protein GI | 218668036 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.736908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGACCGC GCTGGGACGC CGTTCTGCTC CTGCTCGCCA TTGTGGCCTT TTTGGGGATC
AACTTTTTCA CCAGCGCCGG GGGGCCGCTG AGCCATTATT TCGTGCCCAT GCTGGTGATT
TCGGCGGGGA TCGTCCTCTT TCTGCTCTCC CTGGTACTGA TCTCGGTGGT GGCGCTGCTG
TTGCGACTGC GGCGAGGCGA GGTGGGCAGT CAACTGGCTA CCCGCCTGGT GGTCATCATC
ACTCTGCTCA GTTTTTTGCC GGCAGCCGTC GTTTTCGGTT TTTCCTGGCA GTATCTGAAT
CGGGGCGTGG ACTCGTGGTT CAGCAGCGCT GTGCAGAGTG CGCTGGATCA GGCCCTGAAT
GTGGCCAAGG CGGGCGTGGA TCGCTACCGC AATTCCACGT TGCTGGCGGC GGAAAGCATT
GCCCAGGCGC TGGTGGGGGA GTCGGACAGC AGCGCCGTAA TCACCGTGAT TGCCCTGCGC
GATCAGTATC GCCTGAGCAG CGTAACCCTT TTCTCCAGCG ACAACCGGAT CATCGCCACC
AGCAGTGATA ACCTCAGTCT GGCCCCGCGT GTGCCGCGCC GGGAAATTCT CGCCATGGAA
GAGGGCCATC CGACCGCCAC CATCGAGCCG GAACCCAAGG GCGGCCTGCT GGTAAAGGTG
CTGATCCCGG TGCTGAGCCC ACACCTGGGG GAAAGCAACC GCATGCTTTA TGTGGAGCAA
CCCATCCCCG AGCAACTGAC TCGGGCCGCA GAGGCGGTGC AGGTGGCATA TACCCGGTAT
CACCAGTTGA TGCTGATGCG CGAACCGATG AAAACGGCCT TTCAGCTCAG CCTGGCGGTG
GCCTTGCTGC TGGCTGTGCT GTCGGCGGTG TGGATGGGTT TGCATCTGGC GCGACGACTG
ACCGCGCCCA TCGCGCGTCT GGCGGCGGGA ACCCAGGCGG TGGCACGTGG GGAGTTCATT
CCCTTGCAGA CAGTGGCGAG TCACGACGAG CTGGGCGTCC TGATACATTC GTTCAACAAT
ATGACCCGAC AACTGGCGCG GGCCAAGCAG CAGGCGGCGG CGGCCCAGGA GCAGGCGGAG
CAGCGGCGGT TGTATCTGGA GACCGTGCTC GGCCAGATTT CCAGCGGCAT CCTGACCTTC
GATGGCGAAA ATCGTTTGGC CGAAGTCAAC GCTGCGGCGA CCCATATCCT TCAGGAGGAT
CTGCTCAGAG GCAGCGCCCT GGAAGGCCTG CATGACGGCA CCGCGCTGGA ACCCCTGTGG
AAACTGGTGG CGGATTGGGT GGAACATCCT CGTAACGGGA TGCAGAAAGA GTTGCAGATC
GAGCGCTCCG ACGGGCCGCA GACCATTATC GTGCATGGCG CGCATTTTGC GGATGACGCC
GGTAGTCGGG GTTTCGTCCT GGTTTTCGAT GACATCAGTA CGCTGGTCGC CGCCCAACGC
AGCGCCGCCT GGAGTGAAGT GGCGCGGCGT CTGGCCCACG AGATCAAGAA CCCGCTCACC
CCCATTCAGC TCTCCGCCGA GCGGCTGCGG CGCAAATATC TGGAACGCCT TGGCGACGAG
GGGGAGACCC TGGATCGTGC CACCCGCACC ATCATCCATC AGGTGGACGC CCTCAAGGTG
ATGGTGGATG CCTTCTCGGA GTACGCCCGG CAGCCGCAAC TGGAGTTGCG CCCGCTCGAT
CTCAACACGC TGATTCTGGA CGTGCTCGAC CTGTATCGTG GGCAAGAGAG CGGAGTGGAG
ATTCGGGCGG AGCTGGGTGC GGGCCTGCCC CCCCTGCGGG CCGATGTGCA TCGCCTGCGC
CAAATCCTCA ATAATCTTCT GCGCAATGCC CTTGACGCCT TACAGGGTGG CGTAGAATCC
ACTGATGGTA AGCATATTCT GATTCGCACC CGTTTGACGG ACGCCGGCCC CACAAAGATG
CTAGAGTTGA GTGTGTTGGA TGACGGGCCC GGCTTCCCGG TCGAGTTGCT GGCGCGGGTT
TTTGAGCCCT ACGTCAGCAC CAAGGTGAAG GGTTCCGGGC TGGGTCTCGC CATCGTCCGG
CGTATCGTTG AGGAGCACGG CGGGCAGATT ATCGCCGATA ATCAGGGTTT GCAGGGCGGT
GCGCGTATCG TTATTGATTT TCCGTTAGGT TGA
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| Protein sequence | MGPRWDAVLL LLAIVAFLGI NFFTSAGGPL SHYFVPMLVI SAGIVLFLLS LVLISVVALL
LRLRRGEVGS QLATRLVVII TLLSFLPAAV VFGFSWQYLN RGVDSWFSSA VQSALDQALN
VAKAGVDRYR NSTLLAAESI AQALVGESDS SAVITVIALR DQYRLSSVTL FSSDNRIIAT
SSDNLSLAPR VPRREILAME EGHPTATIEP EPKGGLLVKV LIPVLSPHLG ESNRMLYVEQ
PIPEQLTRAA EAVQVAYTRY HQLMLMREPM KTAFQLSLAV ALLLAVLSAV WMGLHLARRL
TAPIARLAAG TQAVARGEFI PLQTVASHDE LGVLIHSFNN MTRQLARAKQ QAAAAQEQAE
QRRLYLETVL GQISSGILTF DGENRLAEVN AAATHILQED LLRGSALEGL HDGTALEPLW
KLVADWVEHP RNGMQKELQI ERSDGPQTII VHGAHFADDA GSRGFVLVFD DISTLVAAQR
SAAWSEVARR LAHEIKNPLT PIQLSAERLR RKYLERLGDE GETLDRATRT IIHQVDALKV
MVDAFSEYAR QPQLELRPLD LNTLILDVLD LYRGQESGVE IRAELGAGLP PLRADVHRLR
QILNNLLRNA LDALQGGVES TDGKHILIRT RLTDAGPTKM LELSVLDDGP GFPVELLARV
FEPYVSTKVK GSGLGLAIVR RIVEEHGGQI IADNQGLQGG ARIVIDFPLG
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