Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0021 |
Symbol | sun |
ID | 7134190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 22286 |
End bp | 23590 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643528438 |
Product | sun protein |
Protein accession | YP_002424535 |
Protein GI | 218666805 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAA TGCGAACAGG CATTGAACGG GCAAAAAGCA CATCGGGTGG GGCCGTGCGC AAGGCCGCCA TTACCGTATT GCGCGGTGTG GATAGCGGAC AGACGGTGGA TGCCGCGCTG CTGCCGGTTT CGTTGACCGG TACGGATCGG GCGACCTTGC AATGGTTGGT TCTGGGTACG CTGCGCGAAT TTCTGTCCGT ACAGGCCCTT TCCGCAAAAT TGTTGCGCAA GCCGTGGCGC GAGGAGGATG CCGATCTCGG CTTTCTGCTC AGTCTGGCCC TTTTCGAGTT ACGCCACGGC CAACGACCCG CCTTTGCAGT GGTCAATGAC TGGGTGGAGA TGACAGAGGC CGTCAAAAAA CCGTGGGCGC GCGGCCTGAT GAATGCCGTC CTGCGCCGTT ATCTGCGAGA GCGTGAGGTT TTGGATACAG CGCTGGTCGA TCGCGATCTC GGGCATCCGG CCTGGTTGGC GGCGCGCTTG CGCGCGGCCT ATCCGCAGGA CTGGCCGGCC ATTGCCGCAG CCAATAACAG CGCGCCGCCC CTCTGGCTGC GGGTGAATAC GCAGCGGGTG GACCCCGGTG CATATCGGCG GTTGCTGGCG GAACAGGGCC GTGAGGCCGA GGGCGTGACG TGGAGTGCGG CGGCCTTGTG CCTGCCCGCC AGTGTGCCGG TAGCGACCCT GCCGGGCTGG GATGCCGGCT GGGTGGCGGT GCAGGACGGC GCGGCACAAC TGGCGGCCCA CATTCTCGCG CCCCGGGAGG GGGAGCGAAT TCTGGATGCC TGTGCGGCAC CCGGCGGCAA AACGGCGCAC CTGTGGGCAT TGGGGGCTAC GCGCCTGGAT GCCCTGGACC GCTCCGCGGA ACGCCTGAAC CGGGTGCGTG AAACTCTGGA AAGACAAGGA GGCGAGGTGC ATTTGCAGGC GGCCGATGCG GCGGAAACCG CCACTTGGTG GAATGGTGAG ACCTATGACG CCATTCTCCT GGATGCACCC TGTACCGGCA CCGGGGTCAT TCGCCGCCAT CCCGATATTC GTCTGCGCCG CCAACCGGAA GATGTGGCCG AAGCGGTGGC GCAACAGGCG CGTCTGCTGG AAGGGTTGTG GCCTTGTCTG CGCCCCGGCG GTCGGTTGCT CTATGCCACC TGCTCGGTAT TGCCCGAGGA GAACGAAGAA CAGATCGCCG CCTTTGTTCA GCGGCATTCC GATGCGCGCC GCATGGCGCA TCCGCTGACC GGGCAACGCC TGCCCGGCCA GGAAGATATG GATGGTTTTT ACTATGCCTT GCTGGAGAAG GACGCATGCG CCTGA
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Protein sequence | MKEMRTGIER AKSTSGGAVR KAAITVLRGV DSGQTVDAAL LPVSLTGTDR ATLQWLVLGT LREFLSVQAL SAKLLRKPWR EEDADLGFLL SLALFELRHG QRPAFAVVND WVEMTEAVKK PWARGLMNAV LRRYLREREV LDTALVDRDL GHPAWLAARL RAAYPQDWPA IAAANNSAPP LWLRVNTQRV DPGAYRRLLA EQGREAEGVT WSAAALCLPA SVPVATLPGW DAGWVAVQDG AAQLAAHILA PREGERILDA CAAPGGKTAH LWALGATRLD ALDRSAERLN RVRETLERQG GEVHLQAADA AETATWWNGE TYDAILLDAP CTGTGVIRRH PDIRLRRQPE DVAEAVAQQA RLLEGLWPCL RPGGRLLYAT CSVLPEENEE QIAAFVQRHS DARRMAHPLT GQRLPGQEDM DGFYYALLEK DACA
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