Gene AFE_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0016 
Symbol 
ID7134483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp18176 
End bp18616 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID643528433 
Productsmg family protein 
Protein accessionYP_002424530 
Protein GI218665289 
COG category[S] Function unknown 
COG ID[COG2922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACG TCATAGATAT CATCAGTTAT TTGCTCGACC ATCTCGACGA AGACGACAAC 
GACGACATGG TTGAAGAGCA TTTGCGTGCT GTCGGTTTTG CCGACGGCGA TATTCAGCGT
GCCCTCGACT GGATGGAAGG CTTTGCGGTA GAGGAGCAAG AGGCGACCAG CCCCCGCTCT
CTGCGCGCCT ACCATCCCTA CGAACAGCAA AGTCTTTCGG TGGCCGCCCG CGGGCAGTTA
CACGACTGGG AGCGGCTTGG TGTCATCAAC GGCGCCATGC GTGAACGCAT TATCGATCGC
CTGCTCGCCC TGGAACTGGA CGACACCGAT CTCGAAACCC TCGACTGGGT GACCTTCATG
GTGATGGCCA ACGACCCCGG TCCCGAGGCC TTCTGGGTCG ATGCCCTGCT GGGCAATGAC
GGCGCACGGA TTCTCCACTG A
 
Protein sequence
MEDVIDIISY LLDHLDEDDN DDMVEEHLRA VGFADGDIQR ALDWMEGFAV EEQEATSPRS 
LRAYHPYEQQ SLSVAARGQL HDWERLGVIN GAMRERIIDR LLALELDDTD LETLDWVTFM
VMANDPGPEA FWVDALLGND GARILH