Gene AFE_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0008 
Symbol 
ID7134319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp12061 
End bp12525 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content58% 
IMG OID643528426 
Productspore coat protein 
Protein accessionYP_002424523 
Protein GI218667234 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGA AGCTCGCTTT AGCCGCACTG CTGATTTTTG CGCCGACGGC GGTCGATGCG 
GCCTGCAGCG TTACCGCCAC CGGCGTTGCG TTCGGAACCT ATGTGCCGTC CGCCGCCTCG
AATTCCACCG GCACAGTGAC GGTCAGTTGT AGCGCTACCC TTGGGCTGTT GTTCAATTGG
ACGATCGCGC TCAATGCGGG TGTCAACAGC GGTGGCAGCT TTTCCAACCG ACGGATGGCC
TCCGGAAACT CCTATTTATC CTACCAACTC TATACCGATT CCGGGCATAC TACGGTATGG
GGCGACGGTA CAAGCGGCAC CGCGACGGTC AGTGGTAATT GTCTAATTAG TTTCCTGGGC
ATACCCTGCT CTGGCAGCGC CACCGTCTAC GGCCAGATTC CTGCCCTGCA AAATCCAAGC
CCCGGCGCCT ACACCGACAC CATTACGGTA ACGGTCACGT ACTGA
 
Protein sequence
MKRKLALAAL LIFAPTAVDA ACSVTATGVA FGTYVPSAAS NSTGTVTVSC SATLGLLFNW 
TIALNAGVNS GGSFSNRRMA SGNSYLSYQL YTDSGHTTVW GDGTSGTATV SGNCLISFLG
IPCSGSATVY GQIPALQNPS PGAYTDTITV TVTY