Gene AFE_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0005 
Symbol 
ID7134922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp8385 
End bp8897 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content56% 
IMG OID643528423 
Productspore coat protein 
Protein accessionYP_002424520 
Protein GI218666859 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.177415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTGT TTCGGGAACA GCACAAAAAA TTATTCTTCG GCCTCAGCGT GCTGTCAACG 
CTGACCCTTG GTCTGTTATC TGGTCAGACC GAGGCCTCTA CAGCCACTGC CACGTTCACG
GTTACCGCTA CCGTTGCGGC CACTTGCACG ATTTCCGCCA CCAACCTGGC TTTCGGCACC
TATACCGGTG CGGTAACAAA CGCCAACTCC ACGGTTACCG TCACCTGCAC CAACACCACA
CCCTACAATG TTGGTCTTAA CGCAGGAACG GCCACTGCTG CAACCGTAAG CACACGGGCA
ATGACTGGCC CCAGCTCGGC AACCTTGTCT TACGGACTCT TTCAGGATGC GGCGTACACC
ACTAACTGGG GCAACACCGT GGGCACAGAT ACGAAAACCG GAACGGGGAA TGGCAGCGCC
CAGGCACTGA CCGTTTATGG CCAAATTCCG GCTGGGCAGT ATCCTGCACC AGGAACCTAT
ACCGATACCA TCACCGCGAC GATCACCTAC TGA
 
Protein sequence
MKLFREQHKK LFFGLSVLST LTLGLLSGQT EASTATATFT VTATVAATCT ISATNLAFGT 
YTGAVTNANS TVTVTCTNTT PYNVGLNAGT ATAATVSTRA MTGPSSATLS YGLFQDAAYT
TNWGNTVGTD TKTGTGNGSA QALTVYGQIP AGQYPAPGTY TDTITATITY