Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0005 |
Symbol | |
ID | 7134922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 8385 |
End bp | 8897 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643528423 |
Product | spore coat protein |
Protein accession | YP_002424520 |
Protein GI | 218666859 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.177415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATTGT TTCGGGAACA GCACAAAAAA TTATTCTTCG GCCTCAGCGT GCTGTCAACG CTGACCCTTG GTCTGTTATC TGGTCAGACC GAGGCCTCTA CAGCCACTGC CACGTTCACG GTTACCGCTA CCGTTGCGGC CACTTGCACG ATTTCCGCCA CCAACCTGGC TTTCGGCACC TATACCGGTG CGGTAACAAA CGCCAACTCC ACGGTTACCG TCACCTGCAC CAACACCACA CCCTACAATG TTGGTCTTAA CGCAGGAACG GCCACTGCTG CAACCGTAAG CACACGGGCA ATGACTGGCC CCAGCTCGGC AACCTTGTCT TACGGACTCT TTCAGGATGC GGCGTACACC ACTAACTGGG GCAACACCGT GGGCACAGAT ACGAAAACCG GAACGGGGAA TGGCAGCGCC CAGGCACTGA CCGTTTATGG CCAAATTCCG GCTGGGCAGT ATCCTGCACC AGGAACCTAT ACCGATACCA TCACCGCGAC GATCACCTAC TGA
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Protein sequence | MKLFREQHKK LFFGLSVLST LTLGLLSGQT EASTATATFT VTATVAATCT ISATNLAFGT YTGAVTNANS TVTVTCTNTT PYNVGLNAGT ATAATVSTRA MTGPSSATLS YGLFQDAAYT TNWGNTVGTD TKTGTGNGSA QALTVYGQIP AGQYPAPGTY TDTITATITY
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