| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0004 |
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| Symbol | |
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| ID | 7135378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 4784 |
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| End bp | 8290 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643528422 |
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| Product | hypothetical protein |
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| Protein accession | YP_002424519 |
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| Protein GI | 218667844 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGGG AGATCCTGGT GCTTAATTTA CTAAACTTTG AATATAAAGA ACTTTTTACT
TCTGAAGGGC TCGCGCGGCT GGATGGGGAA TTTCTTCGTG TCCTGGCGGA AAAAGACCAG
ACCCTGGTGG AAGACCTGCA GGTATATCGT GCCGCCGGAG CGCGGCCTGC GGATAAAGCC
CAGAGCGAGT TTCTGCTGCG GCTTGCGCCG CACCTGGAAC GATTTGTCGC GCAGCTCTTC
CACCTGGGGT CGGAAGTGGC GGCGTTGCAG GCCCGGACCC GCAGTCATGA CGTAGTCATG
GCGTTCAAAA AGCATTTCGT GTTGCGCCGC GCGCGCCGTT ACCGGGGCGA ATTCCCCGAA
TCCTTTGCCG ATCTGGATCA GTGGTTGGAC AGCGAAATCC GGCAGCGTGG CTGGCCGCTG
GAAGATCGCG AATGGGCCAT TGCCCGGCTG GGTGAAGCAT GGCTCGAGGA TGAAGCGGCT
CATGCCGTGG CCATCGACCG TCTGACCCGG TGGTGTGCCC GCATCCTGAG TGATCCACAG
GCCGCCCTGG CGGTGCAGGG CTGGTCCAGT TTCCGTCTCC CCCAACGAGT GGACCACGAG
GCGCTGGTAC CCTTGAAACG TCGGGAGGAT CTCCCCGGTG CACCCTTCGT GGCGCCGGAC
GGCACCCTGC GGCGCCGCGA CAGCTTTCAT CTGACCGATC TGCGTATGGA CGCCCGCAGC
GTCCAGAATG AAGTCCATTA TTGTTTGTAC TGCCATGATC ACGAAGGTGA TTTTTGTTCC
AAGGGCTTTC CGGAGAAAAA GGGCGTGCCG GAACTGGGTC TCAAGGTGGA CCCCCTGGGC
GTCACCCTGA CAGGCTGTCC CCTGGAAGAA AAAATCTCCG AGATGCAGGT ACTGAAGCGG
GACGGATTCC ATATCGCCGC CCTGGCCATG GCCATGGTGG ACAACCCCAT GGTCCCCGCC
ACCGGACACC GCATCTGCAA CGACTGTATG AAGGCCTGCG TCTACCAGAA GCAGGATCCG
GTGAACATCC CGCAGATTGA AACGCGGATC CTCACGGATG TGTTGAATCT GCCCTGGGGC
GTGGAACTCT ACGATCTGCT GACCCGCTGG AACCCGTTGC GCGCCGTGCA ATACTTGGCG
CAGCCCTATA ACGGGCGCAA GGTACTGGTG GCGGGCATGG GCCCGGCTGG CTTCACCATG
GCCCATCATC TCCTGCAGGA AGGTTGTGCG GTGGTGGGTA TCGATGGCCT GAAAGTCGAA
CCCCTGCCCC GGCAGTGGCT GGAGCAGCCC ATCCGCGACT GGAGCCATCT CCAGGAGGAC
CTCGACGAAC GCATTCTGCT CGGGTTTGGC GGTGTGGCCG AATATGGCAT TACCGTGCGC
TGGGACAAGA ATTTTCTCAA GTTGATCTAC CTGACCCTGG CGCGGCGCTC GAATTTCCAG
ATTTTCGGCG GCGTACGGCT GGGCGGGACC ATCACCCTCG AAAACGCCTG GGAACTGGGT
TTCGATCATG TCTGCATCGC TACCGGCGCG GGTCTGCCGC GGGTGGTGCC CATGGGCGAG
AGTCTGGCGC GCGGTATGCG TCAGGCCAGC GACTTCCTCA TGGCGCTGCA GCTCACCGGA
GCGGGCAAGC GGTCCAGTCT CGCCAATCTG CAGGTACGCC TGCCGGCGGT GGTGATTGGC
GGTGGCCTCA CGGCGGTGGA TACCGCCACC GAGGTACAGG CCTATTATGT GCGGCAGGTA
GAGAAGGTGC TGGCGCGCTA CGAAGCGATG GTGACCCATT CCGGAGAAGA AAAACTCCGC
GCCGGACTCT CCGCCGAGGA TGCCGGGATT CTCGACGAGT TCCTGACCCA CGGCCGCGCC
GTGCGTGCCG AGCGCGAGCG CGCCGCAGCA GGGAACGAAT CGCCCAATTT CGTGCCGCTG
ATCCAGTCCT GGGGCGGCGT CACCCTGGCA TACCGGAAGG GGATGCAGCA GGCACCCGCC
TATACCCGCA ACCATGAAGA ACTCATCAAG GCCATGGAAG AAGGGATCTA TTATGGTGAG
GGTCTCGATC CTCTCCGGGC AGAATTAGAT AGCTATGGGC ATATCGCGCA CATGGTCTTC
CGCCAAATGC GCGAGGTGGA AGGGCGCTGG CTGGCCAGCG ATCAGGACGT GCGGCTTCCC
GCGCGGGCCG TCTTCATTGC CGCCGGCACT GTCCCCAACA CCATCTATGA AAGGGAATAT
CCGGGGACTT TCCAACTGGA CGGGGACCAC TTCCTGACCC ATGTGGCCCA CGACAACGGG
CCGTTGCAAG CGGTGCAGGT GGCCGAGCAC TGCAAAGCCC CCGAGGCCGG TCCCTTTACT
TCCTATGGTG ATGCGCAGGG ACACCGGATC AGTTTTATTG GGGATACCCA CCCGGTCTTC
CACGGCAGCG TGGTCAAGGC CATCGCCTCG GCCAAGGCGA CGTATCCGCA GGTCATGCAG
AGCCTGGGGA CGCTGGATAC CGCCGTGGAT CCCGACGTGC ATGGCTTTCA GCAACGGTTG
CAGCATCTGC TGAGCATGCG GGTACTCCGC ATGGATCGCA GCAACCCCGC CGTCACCGAG
ATGTGGGTGG AAGCCCCGCT GGCGGCCCGC AATTTCCGGC CGGGACAGTT TTTCCGTTTG
CAGACCTTCG AGAGTCACAG CCCGATCGTG GACGGTACCC GCCTGCAGAT ACCGGTGCTG
ACGGTCAGCG GTGCAGGGGT GGAAGGCGAC GCGGTGCGCC TCATGATCCT GCAGTGGGGC
ACCGGACCGC GTCTGGTGGG ACGTTTGCAG CCGGGCGACC CTCTGATACT CATGGGACCG
ACCGGCGCGC CCACCGACAT CCCCAGCGGC AAGACCATAC TGGTGGTCGC GGGACGCTGG
GGTGCGGCGG TGATGCTGGA TATCGGCCCG GCCTTGCGGG CGGCGGGCAA CCGCGTGCTC
TATGTGGCGG CATTGGGCAA AGCCAGCGAA CTGGATCACC AGGCGGAGCT GGAAGAAGCC
GCGGACCAGA TCATCTGGTG TACGGGCAGC GGCTCGTTGA TCGAGACCCA CCGCCAGCAG
GACCTCAGTG TCGAGGCCTC TGACATGGTC GCCTTGTTGC GGGCCTATGG GGCCGGGGAG
TTGCCGGGGC AAAAGGCCCA TGGGATGGAG ATCGCCCTGA ACAGTGTGGA TCGCCTGATG
GTCATGGGGT CCACCGGCCT GCTCAAGGCC TTTCAGCAGG CCCTCCAGGG GGAGCTACAG
CCCTATTTCC GGGCCGATCT GGAGGCTACG GCGACGGTGG GCAGTCCCAT GCAGTGTATG
CTCAAAGGCG TCTGCGCCCA GTGTCTGCAA TGGCAGATCG ACCCCGAAAC GGGACAGCGC
ACCAAGGCGG TATTTTCCTG CGCCCAGCAG GATCAGCCCC TGGCCTGGGT GGATCTGGAC
AACCTGACCG CCCGCCAGAG TCAGAATCGC TTGCTGGAAA GACTCTCCAG TCAGTGGCTG
GATCACCTAA CGTTCAGGGG AATATGA
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| Protein sequence | MTREILVLNL LNFEYKELFT SEGLARLDGE FLRVLAEKDQ TLVEDLQVYR AAGARPADKA
QSEFLLRLAP HLERFVAQLF HLGSEVAALQ ARTRSHDVVM AFKKHFVLRR ARRYRGEFPE
SFADLDQWLD SEIRQRGWPL EDREWAIARL GEAWLEDEAA HAVAIDRLTR WCARILSDPQ
AALAVQGWSS FRLPQRVDHE ALVPLKRRED LPGAPFVAPD GTLRRRDSFH LTDLRMDARS
VQNEVHYCLY CHDHEGDFCS KGFPEKKGVP ELGLKVDPLG VTLTGCPLEE KISEMQVLKR
DGFHIAALAM AMVDNPMVPA TGHRICNDCM KACVYQKQDP VNIPQIETRI LTDVLNLPWG
VELYDLLTRW NPLRAVQYLA QPYNGRKVLV AGMGPAGFTM AHHLLQEGCA VVGIDGLKVE
PLPRQWLEQP IRDWSHLQED LDERILLGFG GVAEYGITVR WDKNFLKLIY LTLARRSNFQ
IFGGVRLGGT ITLENAWELG FDHVCIATGA GLPRVVPMGE SLARGMRQAS DFLMALQLTG
AGKRSSLANL QVRLPAVVIG GGLTAVDTAT EVQAYYVRQV EKVLARYEAM VTHSGEEKLR
AGLSAEDAGI LDEFLTHGRA VRAERERAAA GNESPNFVPL IQSWGGVTLA YRKGMQQAPA
YTRNHEELIK AMEEGIYYGE GLDPLRAELD SYGHIAHMVF RQMREVEGRW LASDQDVRLP
ARAVFIAAGT VPNTIYEREY PGTFQLDGDH FLTHVAHDNG PLQAVQVAEH CKAPEAGPFT
SYGDAQGHRI SFIGDTHPVF HGSVVKAIAS AKATYPQVMQ SLGTLDTAVD PDVHGFQQRL
QHLLSMRVLR MDRSNPAVTE MWVEAPLAAR NFRPGQFFRL QTFESHSPIV DGTRLQIPVL
TVSGAGVEGD AVRLMILQWG TGPRLVGRLQ PGDPLILMGP TGAPTDIPSG KTILVVAGRW
GAAVMLDIGP ALRAAGNRVL YVAALGKASE LDHQAELEEA ADQIIWCTGS GSLIETHRQQ
DLSVEASDMV ALLRAYGAGE LPGQKAHGME IALNSVDRLM VMGSTGLLKA FQQALQGELQ
PYFRADLEAT ATVGSPMQCM LKGVCAQCLQ WQIDPETGQR TKAVFSCAQQ DQPLAWVDLD
NLTARQSQNR LLERLSSQWL DHLTFRGI
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