| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5615 |
|---|
| Symbol | |
|---|
| ID | 7119151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011758 |
|---|
| Strand | + |
|---|
| Start bp | 237990 |
|---|
| End bp | 239216 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643528279 |
|---|
| Product | plasmid partitioning protein RepA |
|---|
| Protein accession | YP_002424275 |
|---|
| Protein GI | 218533460 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | [TIGR03453] plasmid partitioning protein RepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.967203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.199114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCAGT ACGTTCCATC CACAGTTTTG CCACCGGCCC CCAACACCAC GGCGGGCGAT
GATGCGCGCC TGCTCGACCG CCGGCTGCGC GAGATAGCGG CCGTCGTGTT CTCGCCGTCA
GAGACCAAAA CGCTCCGCCG GTTCACGTCC GGTGAGGTGG CGCGCATCCT CGGGGTGACG
GATAGCCGAA TCCGCAAGCT GTCGCCGGAC CTGCTTGTGT CGGAGGCCGA GATTTTGCCC
GGTGGGCGCC GCCTTTACAC TCTTGCGGAC ATCCATGCCC TTCGCGCTCA CCTAGATCAG
ATCGATCGGA CCGGGCGGCG CTATCTCCCC CATCGCAACC CGGCCGCCGG CGAACATCTG
CAAGTCGTCG CGTGCGTTAA TTTCAAAGGC GGCTCCGGAA AGACCACCAC CGCGGCCCAC
CTCGCCCAGT CGCTTGTGCT GCGTGGCTAC CGGGTCCTGG CGATCGATCT CGATCCGCAG
GCGAGCTTGT CGATGTTGCT CGGCGTTCGG CCGGAAAACG AGCGCGAGCC CTACCCTACC
ATCTACGACA CGATCCGGTA CGGCGACGAA CGGCGGTCCA TGTCCGACGT GATTCGCCGG
ACCTATTTCA CCGGCCTGGA TCTCGTGCCC GCCGACTTGG AACTCGAGGT GTTCGAGTTT
GAGGCGCCGA TGCAATCGTC CCGGCGCCAG GCGAACGACA CCGAGCCCCC GTTCTTCGCG
CGGATCGGCT TGGCCCTCGG TGAGGTCGCT GACGATTACG ACGTCGTAGT CATCGATTGC
CCGCCACGGC TCGGCTACCT GACGATCTCC GCGCTCGCCG CCGCGACGTC CCTGCTGATC
ACGATCCATC CGCAGATGCT CGACGTGTCG AGCATGCGCC AGTTTCTGAC CATGATGGAC
GAGTTGATGG AGCCGGTCCG GGCACGGGGT GGGGCGCCGG CCCACGACTG GTTCCGCTAC
CTCGTCACGC GGTTCGAACC GAACGACACA CCGCAAACGG AGGTCGTCGC GATGCTCCGC
GGTCTGTTCG GCGAGCGGGT GTTGCCCAAG GCCATGCTCG ATTCCGCCGC CGTCGCGAAT
TCCGGGCTAC GGGGCCAGAC GGTCTACGAG ACGCCGTTGC GTCGCGACGA GGTGACGGGG
TCCACCTATC GCCGCGCGCT CGATGCCCTC GATGCCGTGA ACGGGGAGAT CGAGAGCTTG
ATCAGCCGGT CGTGGGGACG GGCATGA
|
|---|
| Protein sequence | MNQYVPSTVL PPAPNTTAGD DARLLDRRLR EIAAVVFSPS ETKTLRRFTS GEVARILGVT
DSRIRKLSPD LLVSEAEILP GGRRLYTLAD IHALRAHLDQ IDRTGRRYLP HRNPAAGEHL
QVVACVNFKG GSGKTTTAAH LAQSLVLRGY RVLAIDLDPQ ASLSMLLGVR PENEREPYPT
IYDTIRYGDE RRSMSDVIRR TYFTGLDLVP ADLELEVFEF EAPMQSSRRQ ANDTEPPFFA
RIGLALGEVA DDYDVVVIDC PPRLGYLTIS ALAAATSLLI TIHPQMLDVS SMRQFLTMMD
ELMEPVRARG GAPAHDWFRY LVTRFEPNDT PQTEVVAMLR GLFGERVLPK AMLDSAAVAN
SGLRGQTVYE TPLRRDEVTG STYRRALDAL DAVNGEIESL ISRSWGRA
|
|---|
| |