| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5501 |
|---|
| Symbol | |
|---|
| ID | 7119283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011758 |
|---|
| Strand | + |
|---|
| Start bp | 130967 |
|---|
| End bp | 133162 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643528173 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002424169 |
|---|
| Protein GI | 218533354 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCG TGCGCTCTAT TCCAACCGTT GTGTCCGCGT TCGTAGCTGT CAGCGTCGCG
CCCATCAGCA CCGATGCGAT TGCTCAAGAA ATTGCATTGG AGGAAGGCCG GCGCCCGAAA
GCCTTGCGCG TCGCACCAAC GGACAGGGCA CCTATCGGCA CCTTCGAGCT CGGAGAACTC
TCGACCGTAC TCTCCGAAAT TTCCGTCAGC GGGAGCGGAC GCGAAAGTGG CGGACTGCCG
ACGCCGTCTC AGAGCGTCGT CACAGCGCGT GACGTCTATA CCTTCAACAA GAACACACTG
GATGATGCGC TGACCGTGGT TCCGGGCGTG AGCGCAGCCA ATTCCGGCGG CAGCCGCAAC
GAGCGGCTGA TCTTCGTGCG CGGCTTCGAC CGCTTTCAGG TGCCTCTCTC CATCGACGGC
ATCCGCGTCT ACCTGCCGGC GGACAACCGG CTTGATTTCG GGCGCTTCCT CACGCCGGAC
CTCGCCGAGA TCCAGGTGCA GAAGGGCTAC GTCACCGTGC TGAACGGCCC CGGCGGCATG
GGAGGCGCGA TCAACCTCGT CACCCGCAAG CCGGTGCGGG CGGCGGAAGC CGAGTTTCGC
ACCGGCGTCG AGGTTGGCAA TCGCGGCATC CCGACGGCCT TCACCGGCTT CGGACTGATC
GGCACGCGCC AGGAAAACTA TTACCTTCAG GCCAGCGGCA CGATCCGCGA CAGCAACGGC
TGGTTCCTGT CGCAGGGTTT TCGCCCCGTA CCGATCGGCA ACGGCCCGCC GATCGAGGAT
GGAGGTCGGC GCGACTTCTC GGCGGTCGAC GATTACCGCG TCAACCTGAA GGCCGCACTC
ACACCGAACG CCACGGACGA GTACTCCCTA AGCTACACAA AGCAATCGGG CGCCAAGGGG
GCTCCATACT CGGTGTTCGA GCCCGTCAGC GGCATCACGC CGATGCCGCT CCCCCGGGGG
ACCGCCTTCC AGCGCGATTG GCGATGGCCC TACTGGGATA TCGACAGCCT GTACTTCCTG
TCACGCACGG CGATCGGCGA TAAGTCCTAC CTGTTGGGTC GGGCCTACCA CAACAGCTTC
AACAATCTAC TCTCGGCCTT CGACAATGCG AGCTTATCTA GTCAGCGCCT GCCACGCTCC
TTCGACAGTT TCTACGACGA CACTGCCTAT GGCGGCAGCA TCGAGTTCGG CACCGAGCTG
ATCCCGCTCA ACACCCTCAA GTTTGCCGCG CATTACCGCC GCGATACCCA TACCGAGCGC
CAGTTCCCGG CCCCAGGTCT GCCGAGTTCG GTGATCGAGC CGCGCCAGAC GAGCCAGGAA
GATACCTACT CCGTCGCCGT CGAGAACACC TTCCACGCGA CGGACCAACT CGATCTCGTG
GCCGGCCTCA GCTACGATCG CAACGCGCTA CGCAGGGCGC AGGACTACAA CGCGAGCACG
CGCGCGCTGT TCTCCTATCC GCTGGGCAGC ACCGACGCGG TCAACTGGCA GACGGCCGCA
ATTTACCGAA CCAGCGAGAC GGGTCGGGTT CATGCCAGCG TCTCCTCACG GACTCGCTTT
CCGAACCTGT TCGAGCGCTT CAGCACCCGA TTCGGTGACG CTGTCCCCAA TCCTGATCTC
CGGCCGGAGC GAGCCACGAA CTACGAGGTC GGCTGGTCCG AGCTGTTCTT GGGATCCCTA
CGGCTCTCGC CGGCAGTGTT TTACAGCGAC ATCGAGGACG CGATCCAATC CGTCAGCATT
GGCAATAACC AGATTCAGAA CCAGAACGTC GGCACTGGGC GCACCTACGG CTATGAAGTC
GCCTCGGAGC TGACGCTCTC GCCAGAGCTG TTCGTGGGCG CGAACTACAC CTTCTTGATT
CGCGAGCTGA ACGACCCTCT GCGGCCTGCC CTGAAACCGA CCGGCACACC GCGCCATCAG
GCCTTCGTCT GGGCCACGTG GCAAGCGACG CCCGCTTTGA GCTTCACGCC GAGCGTGGAA
GCGGCGAGTG GTCGCTTCTC GACTGACCGA CTGGAGAACA ACTTCTTCAA AACCGGCGGC
TACGTGCTGG TGAACCTTCA GGCGCAGTAT GCCCTGGATG CGCACGCGAC TGCCGCCATC
GGTGTGCGCA ATCTATTCGA TCATAATTAC TCTCTGGCCT ACGGTTTTCC TGAAGCAGGG
CGTACCGTCT TTGCAAACGT ACGGATGACA TTCTGA
|
|---|
| Protein sequence | MSIVRSIPTV VSAFVAVSVA PISTDAIAQE IALEEGRRPK ALRVAPTDRA PIGTFELGEL
STVLSEISVS GSGRESGGLP TPSQSVVTAR DVYTFNKNTL DDALTVVPGV SAANSGGSRN
ERLIFVRGFD RFQVPLSIDG IRVYLPADNR LDFGRFLTPD LAEIQVQKGY VTVLNGPGGM
GGAINLVTRK PVRAAEAEFR TGVEVGNRGI PTAFTGFGLI GTRQENYYLQ ASGTIRDSNG
WFLSQGFRPV PIGNGPPIED GGRRDFSAVD DYRVNLKAAL TPNATDEYSL SYTKQSGAKG
APYSVFEPVS GITPMPLPRG TAFQRDWRWP YWDIDSLYFL SRTAIGDKSY LLGRAYHNSF
NNLLSAFDNA SLSSQRLPRS FDSFYDDTAY GGSIEFGTEL IPLNTLKFAA HYRRDTHTER
QFPAPGLPSS VIEPRQTSQE DTYSVAVENT FHATDQLDLV AGLSYDRNAL RRAQDYNAST
RALFSYPLGS TDAVNWQTAA IYRTSETGRV HASVSSRTRF PNLFERFSTR FGDAVPNPDL
RPERATNYEV GWSELFLGSL RLSPAVFYSD IEDAIQSVSI GNNQIQNQNV GTGRTYGYEV
ASELTLSPEL FVGANYTFLI RELNDPLRPA LKPTGTPRHQ AFVWATWQAT PALSFTPSVE
AASGRFSTDR LENNFFKTGG YVLVNLQAQY ALDAHATAAI GVRNLFDHNY SLAYGFPEAG
RTVFANVRMT F
|
|---|
| |