Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5458 |
Symbol | |
ID | 7119241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011758 |
Strand | - |
Start bp | 82852 |
End bp | 83814 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643528139 |
Product | pseudouridine synthase |
Protein accession | YP_002424135 |
Protein GI | 218533320 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTTT CCACTCCCGG CTCGCAGAAC CGCGCGCGGG GGAGGTTCGC AGCTCACTCG AGCCCCTCTC CCGTCAGTCT GCCGCGCGTT CTCTCGAAAT TCGGCTTTTG TTCACGACGC TCGGCGGAGG TCTTGATCGA GAGCGGGCGG GTCCGCGTTG ACGGCCGTGT GGTCCGCAAT GCGGGCGTGC GCGTGGATCC CCAGCGCGCT GCGATCTGCG TCGATGGCCG CCGGTTGGTC TCCGCGGCAA AGGTCTACCT GCTGCTGAAC AAGCCACGCG GCCTGCTTAC GACCTATGGC GACCCTCAAG GCCGCAAGAC GGTCTACGAC TGTCTCGCGG GACACGACTT GCCGTTCCTC GCGCCGGTTG GACGACTGGA CTGCGCGAGT GAGGGCTTGC TGCTCATGAC CAACGATACG CGGTGGGCGC ATCGTCTTCT CGATCCAGCC TCCAACGTCG ACAAGGTCTA CCATGTGCAA ATTGATCGCA GGCCGGACGA GGCCCTGCTG ACCGGGTTGC GAGAAGGCGT GGCGCATGAT GGGGAGCGGC TTGCCGCCAA ATCGGTGGCA CCACTGCGTG TCGGCGAGCG CAACGCCTGG CTCGAAGTCG TCCTGAGCGA AGGCCGGAAC CGTCAGATCC GACGCATGAT GGCGCTCAAT GGGGCCGAGG TACTTCGGCT CGTGCGCGTC GCGGTCGGCG GCGTCCGTCT CGGTGATGTG AGGAAGGGCG CGTTCCGCCA CCTGACCGAC GCCGAAAGAG CGTGCTTGGC GGCCGGTGGC AGGACCGACA GCATTCGCCG GTCGCCTACC GCCGGTCGCG CCGAGAATGG AAGGGAAACC TTCTCGGCAG AGCGCTTGCT CCAGCGATCC GTTGCAACTT CTTCAATCCG TTCCGACACC GAACGAGATC AATTGCGCAT GCCGATAGAA GGCGGTGTCG CGCTTGGAAG GCACCTGATT TGA
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Protein sequence | MSLSTPGSQN RARGRFAAHS SPSPVSLPRV LSKFGFCSRR SAEVLIESGR VRVDGRVVRN AGVRVDPQRA AICVDGRRLV SAAKVYLLLN KPRGLLTTYG DPQGRKTVYD CLAGHDLPFL APVGRLDCAS EGLLLMTNDT RWAHRLLDPA SNVDKVYHVQ IDRRPDEALL TGLREGVAHD GERLAAKSVA PLRVGERNAW LEVVLSEGRN RQIRRMMALN GAEVLRLVRV AVGGVRLGDV RKGAFRHLTD AERACLAAGG RTDSIRRSPT AGRAENGRET FSAERLLQRS VATSSIRSDT ERDQLRMPIE GGVALGRHLI
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