Gene Mchl_5406 details

Gene Information

• Locus tag: Mchl_5406
• ID: 7119106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium chloromethanicum CM4
• Kingdom: Bacteria
• Replicon accession: NC_011758
• Strand: -
• Start bp: 22845
• End bp: 23594
• Gene Length: 750 bp
• Protein Length: 249 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643528096
• Product: TIR protein
• Protein accession: YP_002424092
• Protein GI: 218533277

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGGTTC GGCGGGCGAC CAGCGACGTC CTCGCGCGAG GGTCGCGAAA GGGTGCCCGC 
TCGGACGAGG CACCCGCCGT CGCGGCGCCC ATCCGGGTGT TCATCTCGTA CAGCCATATG 
GACGACGCGG CGCGCCGGCG CCTGGACATT CACATGGCGC AACTCAAGCG GGAAGGCGTC 
TCGGTCTTCT TCGACGGCGA CATGATCGCC GGAGCGGAGC TCGACCCGAG GATTCGGCGG 
GAACTCAGGC TCGCCGATAT CTTCGTGGCG CTCGCGAGCC CCGCCTATCT TCACTCCCGC 
TACTGCTTCG AGATCGAGTA CGGCTACGCC CTGCGGAAGG CCAAACGCGG CAAGGTCCAC 
CTGGTCGTTG CGCTGATCGA GGAGTGCCAG TGGCGTCACA CGCGCATGGC CCGGTACAAG 
CTGTTGCCGA AGGACGGCAA GCCCGTCAGC AAATGGCGCC CCCACGGCGA AGCCTTCGAG 
GACATCGTCA ACGGGCTGCG CGGAGTCGTG AAGGCCGTCA GGGCGGACAG GGCGACGTCG 
AGCCTGGACA AGCGGGTGCG CACGGCCAGG GCGGCGCAGC CCGCCAAGCG CCCCTCGGCA 
CCCGAACCGC CCTCCCGGAA GCGGAAGACG GTGCCTGTGG GCCCGTCAAA GGCCGCCGCC 
TCGCCGTCCC GGCCGGCCAA GTCGAGGACG CCGGCGCGCA AGCCGGCGGG CAGACCCCGG 
CAGGGCGGTC CCGGAACCCG GTCGGCCTGA 

 

Protein sequence

MAVRRATSDV LARGSRKGAR SDEAPAVAAP IRVFISYSHM DDAARRRLDI HMAQLKREGV 
SVFFDGDMIA GAELDPRIRR ELRLADIFVA LASPAYLHSR YCFEIEYGYA LRKAKRGKVH 
LVVALIEECQ WRHTRMARYK LLPKDGKPVS KWRPHGEAFE DIVNGLRGVV KAVRADRATS 
SLDKRVRTAR AAQPAKRPSA PEPPSRKRKT VPVGPSKAAA SPSRPAKSRT PARKPAGRPR 
QGGPGTRSA