Gene Mchl_5405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5405 
Symbol 
ID7119105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011758 
Strand
Start bp20860 
End bp22173 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content68% 
IMG OID643528095 
ProductChloride channel core 
Protein accessionYP_002424091 
Protein GI218533276 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0213924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAA TCAACATCAC ACGTAAGATA TATTCTTACC GTTCCCACGC CATCGTCGTC 
GCCACGCAGC GTCGCCTGCT CTTCATCATT GGCGGCACCG GCGTGGGCGC CGCCGCCGTG
TTGATGGCCC TGCTTGCAGA CCACGCGCAG CGCCTGTTTC GCGACCTCAT CGACCTATTT
CCCCTGTCGG CCCTTGCGAT CACCCCTGCG GGCTTCGCGG TCTCAGCGCT TCTCGCCCGC
ACCGTGTTCC CAAACGCGGG TGGCAGCGGC ATCCCGCAGG TGGTCGCCGC CCGCGACCTG
CCCGATCCCG CCTTGCGCGA GCAACTGGTC TCCCTGCGAG GGGCCTCCGG CAAGATCATC
GTAATGACCT TCGGCCTGCT TTGCGGCGCC TCCACCGGTC GCGAGGGGCC GACCGTGCAG
GTTGGCGCCG CGGTCATGCA CGCGGCCGGG CGCCTTGTTC CCGAGCGTCA GCGCGGGCTC
CTGCTCGCGG GCGGCGCGGC CGGGGTCGCT GCCGCCTTCA ACACGCCGCT CGCCGGAATT
GTCTTCGGCA TCGAAGAACT GAGCCGCGCC TTCGAGACAC GCACGAGCGG GCTCACCCTC
GGCGCGATCA TCGCGGCCGG CCTCACCGCA CTCGCCCTTG TCGGCAACTA CACCTATTTC
GGCTCTACCG GCGCCACGCT TCCTCTGGGG CGTGCGTGGC TCGCAGTGCC GGTGTGCGCG
GTCATCGGCG GGCTCGCGGG AGGCCTGTTC AGCCGGGTCG TGCTTCTCGT GCTGCGCGAT
CTGCCTGCCC GCGGCTCGGC CCTAGTAAGG TATCCGGTTT TGCTCGCGGC GCTGTGCGGC
CTCGGCGTCG CGCTCTGCGG GTTTCTCGGT CACGGTTCCG TGCACGGCAC GGGATATGAA
GAGGCGCGCG CGATCATCCA CGGGACAGGC GAGATCGGGC CGGATTTCGC ACCGCTCAAG
TTCGTGGCGA CCGTGCTCTC CTCGGTCAGC GGCATCCCGG GCGGCCTGTT CGCCCCCTCG
CTGGCGGTCG GTGCGGGGCT GGGCGCGGAC CTCGCGCTCA TCTTCGATAC CATCCCGGTC
GGAGCGCTCG CGCTCATCGG CATGGTGTCC TACCTCACAG GCGTGCTCCA GGCGCCGATC
ACCTCCTTCG TCATCGTGTC GGAGATGACG GAGAACCATG CCATGATCAT TCCGCTGATG
GTCTCGGCCG TGATCGCCGA CGCGACCTCG AAGCTCGTGT GCCGCGAAGG GCTCTACCAC
GCGCTTGCCG CGCCGATGGT CGCTCGCCTC GCGCCAAGGT CGAAGACGGA TTGA
 
Protein sequence
MARINITRKI YSYRSHAIVV ATQRRLLFII GGTGVGAAAV LMALLADHAQ RLFRDLIDLF 
PLSALAITPA GFAVSALLAR TVFPNAGGSG IPQVVAARDL PDPALREQLV SLRGASGKII
VMTFGLLCGA STGREGPTVQ VGAAVMHAAG RLVPERQRGL LLAGGAAGVA AAFNTPLAGI
VFGIEELSRA FETRTSGLTL GAIIAAGLTA LALVGNYTYF GSTGATLPLG RAWLAVPVCA
VIGGLAGGLF SRVVLLVLRD LPARGSALVR YPVLLAALCG LGVALCGFLG HGSVHGTGYE
EARAIIHGTG EIGPDFAPLK FVATVLSSVS GIPGGLFAPS LAVGAGLGAD LALIFDTIPV
GALALIGMVS YLTGVLQAPI TSFVIVSEMT ENHAMIIPLM VSAVIADATS KLVCREGLYH
ALAAPMVARL APRSKTD