Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5386 |
Symbol | |
ID | 7119086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011758 |
Strand | + |
Start bp | 44 |
End bp | 1483 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643528076 |
Product | 40-residue YVTN family beta-propeller repeat protein |
Protein accession | YP_002424072 |
Protein GI | 218533257 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.786395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACACC TCCTCCCGAC GACCCTCCTG CTCGCCCTGT TCGGCGGAAC CGCCCTCGCG GGCCAGGCGC CCGGGCCCGC CTCGGCGCCC GACGTGCCGG TCGGACCCCG CGACCGCTTC TACACCTCCG ACCAGTTCTC CAACACAATC TCGGTGATCG ATCCCGCCGC CAACAAGCTC CTCGGTGTCA TCCGCCTCGG CGACACGACG CCCGCGAACC TGAGCCCGCT CTATCGCGGC CAACTGCTCG TCCACGGGAT GGGCTTCTCG CCCGACCGCA AGACACTTGT TGCCGTCTCG ATCGGCTCGA ATTCGATCAG CTTCATCGAC ACCGCCACCA ACACGGTGCG CCACACGACC TATGTCGGCC GCTCGCCGCA TGAGGCCTTC TTCACGCCGG ACGGCCGCGA AGTCTGGGTC AGCGTGCGCG GCGAGGACTA CGTTGCGATC CTCGATGCGG GAACGGGTAG GGAGTCGGGG CGGATCACGG TGCCGAACGG GCCCGGGATG ACGATCTTCT CACCCGATGG CCGCCTTGCC TACGTCTGCT CCAGCTTCAG CCCCGAGACC GTCGCCATCG ATGTGCAGCG CCGGCAGATC GTCGGCCGGA TCAAGCAGGA GAGCCCGTTT TGCCCCGACA TCGCGGCAAC GCCCGACGGC AAGCAGGTGT GGTTCACTCT GAAGGACGTC GGCCGCGTTC AGGTCTTCGA GGCCATCCCG CCGTTCAAGC CACTCAAGAC CATCGAGACA GGCCCGATCA CCAACCACGT CAACATCGCG CGCGCCAAGG CCGGGCAGTT CGCCTACGTG ACTGTCGGCG GCCTCAACGA GGTCAAGGTC TTCCGCACCG ACGACTTCTC GGCCGTGGCG ACCATCCCGA CGGGCGCGCT CCCGCACGGC CTCTGGCCCT CGGGCGATGG GGCGCGGATC TATGTCGGCC TGGAGAACGC CGACGCGGTC GCGGTGATCG ACACAGCCGC CAACGCGGTA ATCGCCACGA TCCCGATCGG CCAGGGGCCG CAGGGCGTGG CCTACGTTCC CGAGGCGGTG CCGAATGGCG CGGGCGCGCC GAACCTCCAG CCCCTCGGCG CGGCCGGCCA GTCGAGCACC CTTACGCTTG ACGGGCGGGA CGGCAAGGCC GCGACCCAGG TGACGCTGTT CGATCAGGGC GTGCTGCAGA CGCTGCAGGC CGCGGTGACT GGGCTCGCAC CGAAGAAACC CTACGTTCTC GCCCTGTCGT CCGATCCGAA GGGCGCTGGC CCTCTTGAGC CTTTAGCTGC ATTCATGACG AACCCAGCGG GCGCCGCCGT GGTCAACGCG ATCGGCCCGA TCCGGCAGGT GACGCTGAAC CCGAACGAGT CGACGCGGCG TAGCCTCGTC ATCGTCGAGG GCAAGCCCGG CGAGACCGGC GCGACGGTCC AGACGCAGGC GCTGCGCTAG
|
Protein sequence | MRHLLPTTLL LALFGGTALA GQAPGPASAP DVPVGPRDRF YTSDQFSNTI SVIDPAANKL LGVIRLGDTT PANLSPLYRG QLLVHGMGFS PDRKTLVAVS IGSNSISFID TATNTVRHTT YVGRSPHEAF FTPDGREVWV SVRGEDYVAI LDAGTGRESG RITVPNGPGM TIFSPDGRLA YVCSSFSPET VAIDVQRRQI VGRIKQESPF CPDIAATPDG KQVWFTLKDV GRVQVFEAIP PFKPLKTIET GPITNHVNIA RAKAGQFAYV TVGGLNEVKV FRTDDFSAVA TIPTGALPHG LWPSGDGARI YVGLENADAV AVIDTAANAV IATIPIGQGP QGVAYVPEAV PNGAGAPNLQ PLGAAGQSST LTLDGRDGKA ATQVTLFDQG VLQTLQAAVT GLAPKKPYVL ALSSDPKGAG PLEPLAAFMT NPAGAAVVNA IGPIRQVTLN PNESTRRSLV IVEGKPGETG ATVQTQALR
|
| |